Cariama cristata (Red-legged seriema): 104165113
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Entry
104165113 CDS
T08341
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104165113 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccri03400
]
104165113 (LIG4)
Enzymes [BR:
ccri01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104165113 (LIG4)
DNA repair and recombination proteins [BR:
ccri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
104165113 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Tox-REase-9
SKA1
Motif
Other DBs
NCBI-GeneID:
104165113
NCBI-ProteinID:
XP_009702965
UniProt:
A0A091M709
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MASATASQPSPKKTVASHVPFADLCSTLERIQMCKSRPEKTKYFRDFLDSWRKFHDALHQ
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRTP
AGSRGDAGDFAMIAYFVLKPRSPKQGRLTIEQVNEHLDAIANNNAAKNKGLLKKSLLQLI
TQSTALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPFVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMNNQVFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPFDGSLTPFIHNVFKNNIQNCILDGEMMAYNPETQTFMQKGNRFDIKRMV
EDSDLQTCFCVFDVLMVNDQKLGHEVLSRRYEILSSVFTPVIGRIHVVHKKSAGTRKEVI
DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVSGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAVAETPPPNEKPTVFHSICRVGSGYTMKELYDLGLKLAKHWKPYHRKDPP
CNILCGTEKPEMYIEPCNSVIVQIKAAEIVNSDMYKTDCTLRFPRIEKIREDKEWYECMT
LDMLEDLRRKAEGKLASKHLHIDEYDEPQEKKRKTTSKVKKIIGIAEQFKAPDLSNVNKI
SNVFEDVEFCVMTGTGEYSKPELESRVAECGGSVVQNPGPETYCVIVGAENVRVKNIIAS
NKYDVVKAEWLLQCFQTKTLVPWQPAFMIHMSPDTKEHFAREYDCYGDSYTADTDVAQLK
EVFSRMKDNKVMPLGMIAELEERYSWNSCQLSIFRGNTVYVDCYAVVNEPRTKICGTTLS
IRALELRFYGAKVVSHLEEGVSHVVVGEDHSRVKEIKALRRTFGKKFKIVSEPWVTESVE
EGVPKNENQYLI
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcgactgcttcacaaccttctcctaaaaaaacggtggcctctcacgtgcct
tttgcagatctgtgttctactctggagcgaatacagatgtgtaagtctcgcccggagaaa
accaagtatttcagggactttctggattcctggagaaaattccacgatgctcttcatcaa
aaagagaaagacgtcacagattctttttatccagctatgcgacttattcttccacagttg
gaaagagaaaggatggcatatggaattaaagaaactatgcttgcgaagctctatattgaa
ctacttaacttaccaaaagatggaaaagacgctgcaaagcttttaaattacagaacgcct
gctggctcacgtggagatgctggagattttgcaatgatcgcatactttgtgttaaaacct
aggagcccaaaacaaggcaggctgacgatagaacaagtcaatgaacacttagatgcgata
gctaataataatgctgctaaaaacaagggcctgttaaagaaaagtcttcttcagttgatt
acccagagcacagcactggaacaaaaatggctcatccggatgattataaaggatctaaag
cttggcgttagtcaacaaactatattttccatttttcatcctgatgcagctgaattgcac
aacgtcacaactgatttggaaaaagtctgcagacaactgcatgatccctttgtctcactg
agtgatgtttctatcatgttgttttctgcctttaaaccgatgcttgctgctattgctgat
gtccagcaaattgagaaacaaatgaataaccaggtattctacatagaaactaagctggat
ggtgaacggatgcagatgcacaaagatggagatgtgtataaatatttttcccgaaatggg
tttgactatactcagcagttcggcgcttccccctttgatggttcgttaacgccatttatt
cataacgtatttaagaacaatatacaaaattgcattctcgatggtgaaatgatggcttac
aatcctgagacgcaaacctttatgcagaagggaaacagatttgacataaaaagaatggtg
gaagactctgatctgcagacctgcttctgtgtgttcgatgtattgatggttaacgatcag
aagctggggcatgaggtactaagcagaaggtacgaaatcttaagtagtgtatttacccca
gtaataggcaggatacatgttgtacataaaaaaagtgctggaacaagaaaagaagtaatt
gatgccttaaatgaagcaatagataacagagaggaagggattatggtgaaagatcccatg
tccacctacaagcctgacaaacgtggggaaggctggctaaagatcaagccagaatacgtc
agtgggctgatggacgaactagaccttttaattgttggtggttactgggggaagggctca
cgcggtggaatgatgtctcattttctgtgcgctgttgcagagacgccccctccaaatgaa
aaacctaccgttttccactctatttgtcgtgttggctctggctatactatgaaggaattg
tacgatctcggtttgaaactggctaaacactggaagccctatcatcgaaaggaccctccc
tgtaacattttgtgtggaactgaaaaacctgaaatgtacattgaaccttgcaactctgtc
atagtgcagatcaaggcagccgagattgttaacagtgatatgtacaaaactgactgtact
ttgagattccctcgaattgagaagataagagaggacaaagaatggtacgagtgcatgact
ttggacatgttagaagatctcagaaggaaagcagaagggaagctggcatctaagcacctt
catatagatgagtatgatgagccacaagagaaaaaaaggaaaactacatcaaaggtgaag
aagataattggaatagctgagcaatttaaagctcctgatctttctaacgtaaataagatt
tcaaatgtatttgaagatgttgagttttgtgttatgacaggaacgggtgaatactcaaag
cctgaactggagagcagagtagctgagtgtggtggtagcgtggtacagaaccctgggcca
gagacttactgtgtcattgtaggagctgagaatgtcagagtgaaaaacatcattgcttcc
aacaagtatgatgtggtgaaggcagagtggctccttcagtgttttcagaccaaaacgctg
gtgccttggcaaccagcctttatgattcacatgtctcctgacacaaaagaacattttgct
cgtgagtatgattgttatggagacagctacacagcagacacggatgttgcacaactcaag
gaagtgttctcaagaatgaaggacaataaggtgatgcctttgggcatgattgcagagtta
gaagaacgttattcatggaacagctgtcagctcagtatattcagaggaaacactgtttat
gtggactgttatgctgttgttaacgagcccagaacgaaaatctgtggaacaacactatca
attagagctttggagctccgtttttatggtgcaaaagtagtctctcaccttgaagagggt
gtttcccatgttgttgtaggagaagatcattcccgggtaaaagagataaaagcgctcaga
aggacatttgggaaaaaatttaaaattgtatctgagccgtgggtaacagagtcagtggag
gaaggagtcccaaagaatgaaaatcagtacctaatttaa
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