Cariama cristata (Red-legged seriema): 104167683
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Entry
104167683 CDS
T08341
Symbol
HFM1
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccri03036
]
104167683 (HFM1)
Enzymes [BR:
ccri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104167683 (HFM1)
Chromosome and associated proteins [BR:
ccri03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104167683 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ResIII
Helicase_C
AAA_22
Glyco_trans_4_2
Motif
Other DBs
NCBI-GeneID:
104167683
NCBI-ProteinID:
XP_009706308
LinkDB
All DBs
Position
Unknown
AA seq
1397 aa
AA seq
DB search
MFNSADIVFSLDNLFYERPDTRQRYLENEEPKIWCIAPAPAIAEIPAAEELQRELEKNTA
SAHMGGRKHQKFIQQCKCNAEEVNDESPALVHFGIASEEVLQLSVEEKEKISFQHESLKM
VSLFLSSDQDKSKTGTGVSQQPGANFSQNKMVPNLPENSDDESVHSTLRKSLFKMSGYMC
KNHYLYTVFKDSSIDVKEIYTYXNTSENMKEVKKVLWRNNHHAPITKDSDFTLHRVKDGD
IASKNGIKMKSFSSASEILDMTGTTGRKLEILRAVTEIPTQFRSIFKEFPYFNYAQSKAL
DDLLYTDRNFVICAPTGSGKTVMFELAITRLLMEAPLPWLNIKVVYMAPIKALCSQRFDD
WKEKFGPIGLSCKELTGDTVMDDLFEIHHAHIIITTPEKWDSMTRRWRDNSIVQLVRLFL
IDEVHVIKDESRGATLEVVVSRMKTVQSSLWRLLENRDHDSVPPLRFVAVSATIPNAEDI
AEWLSDSKMPAVCLKIDEDQRPVKLRKIVLGFPCSDNQTEFKFDLTLNYKIASIIQTYSE
QKPALVFCATRKGVQQAASILAKDAKFLLSIEQKQRLQRSANSLKDSKLRDLLMCGVAYH
HAGMEISDRRIIEGAFTAGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYVGGVFQEYSET
DILQMMGRAGRPQFDTTATAVIMTRWSTREKYIQMLNGADIIESSLHRHLVEHLNAEIVL
HTITDVAVALEWIRSTFLYIRALKNPTHYGFSSGLNKIGIEAKLQELCLKNLNDLSSFDL
IRMDEANNFKPTETGRLMAWYYIAFDTVKQFFTIKGTETLNELITMISNCTEFLDVKLRT
NEKKILNTLNKDKDKITIRFPMEGKIKTREMKINCLIQAQLGCIPIQDFTLTQDTGRIFR
NGLRVTRWLSDFLASSKNNFSALLNSLILAKCFRCKLWENSLHVSKQLEKIGVSLSNAMV
NAGLTSFKKIEDTNARELELILNRHPPFGNQIKESVLHLPKYELDIEQLPKYSDTLAEIL
VTIKLTNYEQLQTKRTATDFHYVTLVIGDADNQVIFNQKIMDSVLLKTGDWKKKIEVKRA
LKSEDISINLISSDYGGRTKQEMTYKKYGNRECNHRCKNKDVCGHDCCKTGVPPKSEMNG
DSKFSLYLADLRSRNSISSVPPVKRLKMQMLNQAQNVDLKQFVFTPKPLLPALPRYCNKR
SSSPPSSPSVDQVANVNSLGVSQKQLQSWDYGKSNALDVDFELRDDVWDYIDDENLVFAS
SFASRELDDCEPLCQYTRSKATNDISKDSCTLQDETNIQNSVVSVVNSTSKVNLSVQSEN
INMFSLQGKKHSNPSQELKNVQCSSISKIISDSSKFTRKEDFFIFAKEQEKEVDPRYLLD
DEINDVKPFLGIFDGIL
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactctgcagacatagtcttttcattggataatttgttttatgaaagaccagat
acaagacaaaggtatctagaaaatgaagagcctaagatttggtgtattgcacctgctcca
gctattgctgaaattccagctgcagaggagttacagagggaactggaaaaaaacacagcc
agcgctcatatgggagggagaaagcaccagaagtttatacaacaatgtaagtgtaacgct
gaggaagtaaatgatgaatcaccagcacttgttcattttggcatagcctctgaagaagtg
ctccaattaagtgtagaagaaaaagaaaaaattagttttcagcatgaaagtctgaaaatg
gtttcattgtttctctcttctgaccaagataaatctaaaacaggaacaggggtttctcag
caacctggtgcaaatttttcacaaaataaaatggtacctaatcttccagaaaacagtgat
gatgagagtgtacattcaaccttaagaaaaagcttatttaaaatgtctggttatatgtgc
aaaaatcattatttatatacagtatttaaagatagttctattgatgtaaaagaaatttat
acgtactgaaatacaagtgaaaacatgaaagaagtgaaaaaagttttatggagaaataat
catcatgctccaataactaaagactcagattttactctgcatagggtaaaggatggagac
attgcgtctaaaaatggaattaaaatgaagtcattttctagtgcttcagagattctggat
atgacaggaactacaggaagaaaattggaaattttgagggctgttacagaaataccaacc
caatttagaagtatttttaaggagttcccctattttaactatgcacagtctaaagctttg
gatgatcttctttatacagataggaattttgtgatttgtgctccgactggttctggaaaa
actgtaatgtttgagctagctattaccaggttactcatggaagccccactgccttggtta
aatattaaagttgtttacatggctccaataaaagctctctgcagtcagcgttttgatgat
tggaaagaaaaatttggacctataggactcagctgcaaggaactgacaggagatacagtg
atggatgatttatttgaaatacatcacgctcacattattatcactacacctgaaaaatgg
gatagcatgactagaaggtggagagacaactctatagtccagcttgtacgactgtttctc
attgatgaagtgcatgttataaaggatgaaagccgtggcgcaacattagaagttgtagtc
agtcggatgaagactgttcagtcttctctttggcgtcttttagagaatcgtgaccatgac
agtgttcctcccttgagatttgtagctgtttctgcaacaatcccaaatgctgaagatatt
gcggaatggctttcagatagtaagatgcctgctgtatgtctgaaaatagatgaggatcaa
cgaccagtgaagctacgcaaaattgttcttggttttccttgcagtgataatcagacagaa
ttcaaatttgacttaactcttaactacaagatagctagtattatacaaacatactcggaa
caaaaaccagcacttgtgttttgtgccacaaggaaaggagtacagcaggccgcttctatt
cttgcaaaagatgctaaatttctactgagtatagaacagaaacaaagattacagaggtct
gcaaattcattgaaagattccaaactgagagatcttttaatgtgtggtgtggcttatcat
catgcgggtatggagatatctgacagaagaataattgaaggagcttttacggcaggagac
ttaccagtactttttactactagcaccttagctatgggagtcaatctacctgcacatctg
gtggttataaaatccacaatgcactatgttggaggagtgttccaagagtacagtgaaact
gatattctgcaaatgatggggagagcaggaaggcctcagtttgacactacagctacagca
gttattatgactcgttggagtacaagggagaagtatatacagatgttgaatggggctgat
ataatagagagcagcttgcacaggcatcttgtcgaacacttaaatgcagaaatagtgtta
catactatcacagatgttgctgtagctttggaatggatacgatcaaccttcttgtacatt
agagccttaaaaaatccaactcattatggtttttcatctggattgaataaaataggaatt
gaagcaaaattacaagaactgtgtttgaagaacttaaatgatttatcatcttttgatttg
atcaggatggatgaagcaaataatttcaaaccaacagagactggaagattaatggcgtgg
tattatattgcatttgatacagtgaaacaatttttcacaattaagggaacagagacttta
aatgaattgattacaatgatatccaactgcacagaatttctcgatgtcaagttaagaaca
aatgaaaagaaaatactgaacactttgaataaagacaaggacaaaataactatcaggttt
ccaatggaggggaagataaaaacaagagaaatgaaaataaactgtcttattcaggctcag
ctaggatgcattcctattcaagactttactttgacacaagatactggcagaatatttaga
aatggcttaagagttactagatggttatcagactttcttgcatcatctaagaacaacttt
tctgctttattaaactctttgattttagcaaagtgtttcaggtgcaaactttgggaaaat
tcacttcatgtgtctaaacaactggaaaaaattggtgtatcactgtcaaacgctatggta
aatgctgggctgacatcatttaaaaaaatagaagacacaaatgcaagggaacttgaattg
attttaaacagacatcctccttttggaaaccagataaaagaatctgttttgcaccttcca
aaatatgaacttgacattgaacagcttccaaaatatagtgatacattggctgaaatctta
gtaaccatcaaattaacaaactatgagcagctacagacaaagaggacagcgacagacttt
cactatgttacattggtcataggagatgctgacaaccaagtcatttttaatcagaagatt
atggattctgtgctgctgaaaactggagattggaaaaagaaaattgaagtgaaaagagct
cttaaatcagaggacattagtataaatttaattagttctgattatggaggcagaactaaa
caagagatgacttacaagaaatatggaaacagagaatgcaaccatcgttgtaaaaataaa
gatgtgtgtggacatgactgctgtaaaactggagtacctccaaagtctgagatgaatgga
gattcaaagttttctttgtacctagctgatttaaggagcaggaactctatttcatctgta
cccccagtaaaacggttaaagatgcagatgttaaatcaagctcaaaatgtggatctcaaa
caatttgtttttacacctaaacctttgctgccagcattgccaaggtactgcaataaacgg
tcatcttcaccaccttcatcaccttcagtggaccaggtagctaatgttaatagcttagga
gtatctcagaaacaactgcaatcctgggattatggaaagagtaatgctttggatgtggat
tttgaactgagagatgatgtttgggattatattgatgatgagaatttagtattcgctagc
agctttgccagtagagaattagatgattgtgaaccactttgccagtatacaagaagcaaa
gccacaaatgacatttcaaaagattcatgcacattacaagatgagaccaatattcagaac
tcggttgtttctgtggttaatagcacatcaaaagtgaatttatctgtacagagtgaaaat
ataaatatgttcagtttacaaggaaaaaagcattcaaacccttcacaagagctgaaaaac
gtacagtgttcttcaatctcaaaaataatctcagactcttctaaattcactaggaaagag
gatttttttattttcgcaaaagaacaggaaaaagaagtggatcctagatatcttcttgat
gatgaaatcaatgatgtcaaacccttccttggaatatttgatggcattttgtaa
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integrated database retrieval system
