Chrysoperla carnea: 123297492
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Entry
123297492 CDS
T09255
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ccrn
Chrysoperla carnea
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccrn03041
]
123297492
03009 Ribosome biogenesis [BR:
ccrn03009
]
123297492
Enzymes [BR:
ccrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123297492
Spliceosome [BR:
ccrn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123297492
Ribosome biogenesis [BR:
ccrn03009
]
Eukaryotic type
Pre-60S particles
Helicases
123297492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
123297492
NCBI-ProteinID:
XP_044735143
LinkDB
All DBs
Position
1:complement(28420909..28424992)
Genome browser
AA seq
735 aa
AA seq
DB search
MVIMADIIRTIDDNDDIPDYSEESDEEVEFQPSQRKHKKKTDFDVNFQFISSSAEYNKDP
WDDLSKYVKRKAKSKTDDKIKEARNKLLTNGVDDDNTEEPNHIDEEIQLSEDELQKDNIR
DKEKKVFKNKKVSQPMEMEDFSEVSNSFDQNTTFYQMNLSRPLLKAIGDLNYVHPTPIQA
ATIPVALLGRDICGCAATGTGKTAAYMLPILERLLYRPVNSEMVTRVLILVPTRELGVQV
YQVTRQLCQHTTIEIGLSVGGLDLKTQETVLRKNPDIVIATPGRLIDHLKNTPTFSLDSI
EVLVLDEADRMLDEYFAEQMKEIVKQCSITRQTMLFSATMTDEVKDLAAVSLKNPVKVFV
DNNRDVAFNLRQEFIRIRENHDADREPILAALICRTFQDHCMVFVQTKLEAHRLHVLLGL
LGIRVGELHGNLTQPQRLEALKKFKDEEVDVLLATDVAARGLDISGVKTVINFSMPNTVE
HYIHRVGRTARAGRAGVSVSLATESDRKIVKDIIKKARNPVKTRIIPPNIIQKYKEKIEK
IEPELEAILQAEKEERMIAKEENRINRAKNILTGENQDNRKREWFQTKKERNEEETKLKE
KSKTINKKDKKKKIKDDQANDPLTKVAFFQSKAAKKQHKPKKIRSVIDDVERPNKGPMKR
KKSNFESDLFDVSKKGVKRMRYEATKVQKSKNSNIKKKNKQNNVNKKVFKGGKGGKLRVQ
NEKVTDYYGNKTLNN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggttataatggcagatataattcgaactattgacgataatgacgatattcctgattat
tccgaggaatctgatgaagaagttgagttccaaccttctcaaagaaaacataaaaagaaa
acagattttgatgtaaatttccaatttataagttcttcagctgaatataataaagatcct
tgggacgatttatcaaaatacgttaaacgtaaggcaaaaagtaagactgacgataagatc
aaagaagcccgtaataaattactgacaaatggagttgatgacgataatactgaagaaccg
aatcatattgatgaagaaatacaactttctgaggatgaacttcaaaaagataacattaga
gacaaggaaaagaaagttttcaaaaataaaaaggtatcacaaccaatggaaatggaagat
ttttcagaggtttcaaattcttttgatcagaatactacattttatcaaatgaacttatca
agacctttgcttaaagctattggtgatttaaattatgttcatccgacaccaatacaagct
gcaacgattcctgtagcattattagggagagatatttgtggatgtgctgctacgggaaca
ggaaaaacagctgcttatatgttaccaattttagaacgtttgttatatcgtccggtgaat
agtgaaatggttacaagagttttaattttagtaccaactcgagaattaggtgtgcaagtc
tatcaagtaacaaggcaattatgtcagcatacaactattgaaataggtctttcagttggt
ggtctagatttaaagacccaagaaacagttttacgtaaaaatcctgatattgtaattgca
acacctggtcgtttaatcgatcatttaaaaaatacaccaacttttagtttagattcaatt
gaagtattagttcttgatgaagctgatcgaatgttagatgaatattttgctgaacaaatg
aaggaaattgttaaacaatgttcaattacacgacaaacaatgttattttctgccacaatg
actgatgaagttaaagatttagccgctgtatcgttaaaaaatcccgttaaagtattcgtt
gataataatcgcgatgttgctttcaatttacgacaagagttcatacggattcgtgaaaat
catgatgcagatcgtgaaccaattttagccgctttgatttgtcgaacatttcaagatcat
tgtatggtttttgtacaaacgaaattagaggcacatcgtttacatgttttattgggatta
ttgggtattcgagtaggtgaactacatggaaatttaacgcaaccgcaacgtttagaagct
ttgaaaaaatttaaagatgaagaagtggatgtattgttggctactgatgtcgcagctaga
ggtttagatattagtggagtaaaaactgttattaatttttcaatgccaaacacagttgaa
cattatattcatcgtgttggtcgaactgcaagagctggtcgtgctggagtttcagtcagc
ttagccacagaatcggatcgaaaaattgttaaagatattattaaaaaagcaagaaatcct
gtcaaaactagaataataccaccaaatataattcaaaaatataaagagaaaatagagaaa
atcgaacctgaattagaagcaattttgcaagcggaaaaagaagaacgaatgattgctaaa
gaagagaatcgtataaatcgagcgaaaaatattttaacaggtgaaaatcaagataatcga
aaacgagaatggttccaaacgaaaaaggagcgtaatgaagaagaaacaaaattaaaagaa
aaatcaaaaacaattaacaaaaaagataagaaaaagaaaattaaagatgatcaagcaaat
gatcctttaactaaggttgcatttttccaatcaaaagctgcaaagaaacagcataaaccg
aaaaagattagatcagttatagatgatgtagaacgaccaaataaaggtccaatgaaacgt
aagaaatctaattttgaaagtgatctatttgatgtgtcgaagaaaggcgttaaacggatg
cgatatgaagcgactaaagttcaaaaaagtaagaatagtaatatcaaaaagaaaaataaa
caaaataatgttaataaaaaagttttcaaaggtggaaaaggtggaaagttacgggtgcaa
aacgagaaagttacggattattatggaaataaaacattaaacaattag
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