Campylobacter curvus: CCV52592_0714
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Entry
CCV52592_0714 CDS
T00576
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ccv
Campylobacter curvus
Pathway
ccv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCV52592_0714 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccv03400
]
CCV52592_0714 (mfd)
Enzymes [BR:
ccv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCV52592_0714 (mfd)
DNA repair and recombination proteins [BR:
ccv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
CCV52592_0714 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CarD_TRCF_RID
TRCF
UvrB_inter
ResIII
UB2H
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
EAU00402
UniProt:
A7GZ77
LinkDB
All DBs
Position
complement(1258642..1261587)
Genome browser
AA seq
981 aa
AA seq
DB search
MQARVYEYLLKNDAQILICEDDKEASLCADAAEFAGFKAFRLPDFRAHFGDDLRSFSEEL
FEISSVLSAYYKFNGKKLIISPFHTLLNRLPKAKHLQSRTINFGQKLNLNELADELMRFG
YDVVDIVEGAGEFSLRGEIIDIYGVNMNEPVRILLFDDEVESIRNYSTATQISSKTELES
VEITPFIANLSKAEFEDVSQKIERMQTDALVNDLNSLGFWAIDDFGDYLAEFECKLVKKI
DLSELADDAKRLEKFEILPEAKVYKDLVVTLNDDFFELNQNKKISVLARNESLFSQFDLR
RFKNVQFVQSPLVLNLTSNEQIIVSLNKFEKKRRVKRASLVVDELKINDYVVHEDYGIGR
FLGLEKITVLGATKEFVVIAYQNDDKLLLPVEHLNLIDRYIAQNGSVAVLDRLGKASFAK
IKEKVREKLFVIASKIVAMAAKRELIAGKVIEKNDLEYLKFVQNAGFDYTTDQQKAVEEI
MSDLKSTRVMDRLLSGDVGFGKTEVAMNAIFACVKSGFSALFFVPTTLLSAQHYKSLKER
FADFGVKIFRLDRFTSAKEKSAMLKVLKDNEPCVCVGTHALLGVKANNVGLIVIDEEHKF
GVKQKEQLKEVSANSHILSMSATPIPRSLNMALSKIKSYSVLATAPSSRLDVRTSVREWD
EKVVKEALMREMRRGGQAFYIHNHIADIEQTAQNLRKILPKIRILVLHSKINAKTTEDEM
MKFERGEYDVLLCTSIVESGIHLPNANTIIIENANKFGMADLHQLRGRVGRSDKQAYCYF
LVEDKDALGGDALKRLLALESNSFLGSGSLLAYHDLEIRGGGNIVGEAQSGHIEAIGYSL
YLKMLEDEINKLLNNDSAKLDKIDLKLSINAFLNQDFIREDRLRLEIYRRLSKYESVSAV
YEIASELEDRFGKMDVYTKQFLDLIAIKILALKCGYKAISNSEQNIVLTRKNDEKVRLRS
RSKDDDDVIDEILIHLRKEAK
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaagggtctatgaatatcttttaaaaaatgacgctcaaattttgatctgcgag
gacgacaaagaggcgagcctatgcgccgatgcggcggaatttgccggctttaaagccttt
aggctgcctgattttagagcgcattttggcgacgacctgcgaagcttcagcgaggagctt
tttgaaatttcaagcgtgcttagcgcttattataaatttaacggcaaaaagctcatcatc
agcccctttcacactctgctaaaccgcctgccaaaggcaaaacacctacaaagcaggacg
ataaatttcggccaaaagctaaatttaaacgagcttgcagacgagctcatgcgctttggc
tacgatgtcgttgatatcgtcgaaggtgcgggagaatttagccttagaggcgagatcatc
gacatttacggcgtaaatatgaacgagccggtcaggattttgctctttgacgatgaggtc
gagagtatcagaaactactccaccgccacgcaaataagctcgaaaacggagctagaaagc
gtcgaaataacgccatttatagcaaatttaagtaaggctgagtttgaagacgtgagccaa
aagatagagcggatgcaaacggacgctttggtgaacgatctaaattctctgggcttttgg
gcgatagatgactttggtgattatctagccgaatttgagtgcaaactcgttaaaaagatc
gatcttagcgagcttgcagacgatgcaaagaggcttgaaaaatttgaaattttgcccgag
gccaaagtctataaagacctggtcgttacgttaaacgatgatttttttgagctcaatcaa
aacaaaaagatcagcgtcctggcgcgcaacgaaagcctctttagccagtttgatctaagg
cgctttaaaaacgtgcagttcgtgcaaagcccgctcgttttaaatttaacctcgaacgag
cagatcatcgtttcgctcaataaatttgagaaaaaaagacgtgtaaagcgtgccagcctc
gtagtggacgagctaaagataaacgactacgtggtgcacgaggactacggcataggtagg
tttttagggcttgaaaagataaccgttttgggtgcgacgaaagaattcgtcgtgatcgct
tatcaaaacgacgataagctgctgctgccggtagagcatctaaacctgatcgatcgctac
atcgcgcaaaacggctctgtcgcggtgctagatcgtctgggtaaggcaagctttgcaaag
ataaaagagaaggtgcgcgagaaacttttcgtcatcgcttcaaagatcgtcgccatggcc
gcgaagcgcgagctcatagccggcaaagtgatagaaaaaaacgatcttgaatatctaaaa
ttcgtgcaaaacgcagggtttgactacactaccgatcagcaaaaagcggtcgaggagata
atgagcgatctaaaaagcacgcgagtcatggataggcttttaagcggggatgttggcttt
ggaaagacggaagtcgcgatgaacgcgatatttgcctgcgtcaaatcaggctttagcgca
ctctttttcgtgccgaccacgcttcttagcgcgcagcattataagagcctaaaggagcgg
ttcgcggactttggcgtcaaaattttcaggctcgatagatttacatccgctaaggaaaaa
tcggcgatgctaaaggtgctaaaagacaacgagccttgcgtgtgcgtcggtactcacgcg
cttttaggcgtaaaggcgaacaacgtcggtctcatcgtcatcgatgaggagcataaattt
ggcgtcaaacaaaaagagcagctaaaagaggtctcggcaaattctcatatcctgagcatg
agcgccacaccgatccctaggagcctgaatatggcgcttagtaagataaaaagctactcg
gtattagccaccgcgccaagctcgaggctcgatgtgcgaacgagcgtgagagagtgggac
gagaaggtcgtcaaagaggcgctcatgcgtgagatgagacgcggcggtcaggcattttat
atccacaaccatatcgcagacatagagcagaccgcgcaaaatttacgtaaaattttacct
aaaatccgcatcctggtgcttcactccaagataaacgccaaaaccaccgaagatgagatg
atgaaatttgagcgtggcgaatacgacgtgctgctttgcacgagcatagtagaaagcggc
atccacctgccaaacgcaaacaccatcatcatcgaaaatgcaaataaatttggcatggct
gacttgcatcagctgcgcggacgcgtcggcaggagcgataagcaggcgtattgttatttt
ttagtcgaggacaaggacgcgctgggaggcgacgcgctgaagcgtctattggcgcttgag
agcaactcgtttttgggctctggctcactactagcctatcatgaccttgagatcagaggc
ggcggaaatatcgtcggtgaggcgcagagcggacacatcgaggctatcggctactcgctt
tatctaaagatgcttgaagacgagataaacaagcttttaaacaacgacagcgcaaagctt
gacaagatcgatctaaagctaagcataaacgcctttttaaaccaagacttcatccgcgag
gatcgcctcaggcttgaaatttataggcgtcttagcaaatacgagagcgtgagcgcggtc
tacgagatagcaagcgagcttgaggatagatttggcaagatggacgtttatacaaagcag
tttttagacctcatagcgatcaaaattttagctctaaaatgcggctacaaggcgatctca
aacagcgagcaaaatatcgttttgacgcgcaaaaacgatgaaaaagtgcgcctaagatct
cgcagcaaagacgatgacgacgtgatagatgaaattttgatccatttaaggaaggaggcc
aaatga
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