Corvus cornix (hooded crow): 104685139
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Entry
104685139 CDS
T03546
Symbol
HEXB
Name
(RefSeq) LOW QUALITY PROTEIN: beta-hexosaminidase subunit beta
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00511
Other glycan degradation
ccw00513
Various types of N-glycan biosynthesis
ccw00520
Amino sugar and nucleotide sugar metabolism
ccw00531
Glycosaminoglycan degradation
ccw00600
Sphingolipid metabolism
ccw00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ccw00604
Glycosphingolipid biosynthesis - ganglio series
ccw01100
Metabolic pathways
ccw04142
Lysosome
Module
ccw_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
104685139 (HEXB)
09103 Lipid metabolism
00600 Sphingolipid metabolism
104685139 (HEXB)
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
104685139 (HEXB)
00531 Glycosaminoglycan degradation
104685139 (HEXB)
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
104685139 (HEXB)
00604 Glycosphingolipid biosynthesis - ganglio series
104685139 (HEXB)
00511 Other glycan degradation
104685139 (HEXB)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104685139 (HEXB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ccw03110
]
104685139 (HEXB)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
104685139 (HEXB)
Chaperones and folding catalysts [BR:
ccw03110
]
Intramolecular chaperones
Others
104685139 (HEXB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
104685139
NCBI-ProteinID:
XP_039423225
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Position
Z:66223812..66241355
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AA seq
560 aa
AA seq
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MGRAMGLAGLLLGLVVVPAVLVSTSLRHGAPRAGAEPEPSDWEVAADAVPEDSLWPLPQW
VRTYSRQLQLAPGRFQLVHGAGSSAGPGCGLLQDAFRRYYEYMFGHSRRRDRSRRPLAAR
AEPELFQLQVVIEAGDPGCDRHPQLTSSEAYHLTVTEPVAILKAYEVWGALRGLETFSQL
VHEDDYGSFLVNESEINDFPRFAHRGVLLDTSRHYLPLKSILTNLDAMAFNKFNVLHWHI
VDDQSFPYQSIYFPELSDKGAYSSNLIYTPTDVHLVIEYARLRGIRVIPEFDTPGHTQSW
GKGQKDLLTPCYNGEQPTGSFGPVNPVWNTTYDFMTKFFKEISSVFPDEFIHLGGDEVDF
SCWKSNPEVKKFMKKQGFGTDYAKLESYYVQNIVDIVSSYNKGQMVWQEVFDHKAQLKPD
TVVQVWMASNYAHELSSVTGAGFTTILSAPWYLDYISYGQDWKKYYSVEPLNFPGTEKQK
KLVIGGEACLWGEFVDATNLTPRLWPRASAVGERLWSSSNVTNLQDAYKRLTNHRCRMLR
RGIAAEPVFVGYCAHEGRAP
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagccatggggctggctgggctgctgctggggctcgtcgtggtgcccgccgtg
ctggtgagcaccagcctccgccacggcgccccgcgggccggggccgagccggagccatcc
gactgggaggtggcggcggacgccgtccccgaggactcgctgtggccgctgccgcagtgg
gtccgcacgtactctcgccagctgcagctggcgcccggccgcttccagctggtgcacggc
gccggctcctcggcgggcccgggctgcgggttgctgcaggacgccttccgcaggtactac
gagtacatgttcgggcattcccggcggcgggaccggagccgcaggccgctggctgcccga
gcggagcccgagttgttccagctgcaggtggtgatcgaggcgggggaccctggctgtgac
aggcacccgcagctcacctccagcgaggcctatcatttaactgtaactgagcctgtggct
atactgaaagcttatgaggtatggggtgctttaagaggcttggaaaccttcagccagttg
gttcatgaagatgactatggaagctttcttgtcaatgaatctgaaatcaatgacttccca
agatttgctcatagaggagtcttattagacacttcaaggcattatttaccgttgaaatct
attctgacaaacctggatgccatggcttttaataagttcaatgttctccactggcatata
gtagatgatcagtccttcccttaccagagcatttatttccctgaattaagtgacaagggg
gcatactcctctaatctcatctatactcctactgacgtccatctggtgattgagtatgct
cggttaagaggcatcagagttatcccggagtttgataccccaggacacacgcagtcttgg
gggaaaggtcaaaaagatcttctcactccttgctacaatggagaacagccaactgggtcc
tttggacctgtaaatcccgtttggaatacaacttacgacttcatgactaagttcttcaaa
gagatcagcagtgtatttccagatgaattcattcatttgggaggagatgaagtggacttc
agttgttggaaatctaaccctgaagtgaaaaagttcatgaagaagcaaggttttggcact
gactatgctaagctggaatcttactatgttcaaaacattgtggacattgtttcttcctac
aacaaaggacaaatggtctggcaagaagtgtttgatcacaaagcgcagctgaaaccagac
actgtagttcaagtgtggatggcaagtaactatgctcatgaactgagcagtgtcactgga
gctgggttcaccactatcctgtcagcaccctggtacttagactacattagttatgggcaa
gactggaagaaatactacagtgttgaaccacttaacttccctggaactgaaaaacagaag
aaacttgtaataggtggagaagcctgcctgtggggggaatttgtagatgcaactaacctg
acaccaagattatggcctcgagcaagtgctgttggggaaagactatggagcagcagcaat
gtgaccaacttgcaggatgcctacaaaaggctgactaatcatcgatgccgcatgctccgc
cgtggcatagcggccgaaccagtgtttgttggatactgcgcccatgaaggtagagcgccg
taa
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