Corvus cornix (hooded crow): 104687866
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Entry
104687866 CDS
T03546
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccw03041
]
104687866 (DDX27)
03009 Ribosome biogenesis [BR:
ccw03009
]
104687866 (DDX27)
Enzymes [BR:
ccw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104687866 (DDX27)
Spliceosome [BR:
ccw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104687866 (DDX27)
Ribosome biogenesis [BR:
ccw03009
]
Eukaryotic type
Pre-60S particles
Helicases
104687866 (DDX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
FerA
AAA_22
PRK
Motif
Other DBs
NCBI-GeneID:
104687866
NCBI-ProteinID:
XP_039419186
LinkDB
All DBs
Position
20:6533167..6539568
Genome browser
AA seq
757 aa
AA seq
DB search
MATLESLGLVGTIAEGDVVPVDSESGDSEDEEELRRPPGPRRRGPSGGVFSAEFVFGEAE
AGGEDAWTAALRQLRGKKAATTLDEKIEKVRQKRKLQEKEAKQAKVKDEDAEAEDDQTKK
ECEDCSRDEEDVESEYSLDDESIFAKADKVKVKEKRRSKKGEVEPESFFEDASQYDDNLS
FQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVLER
LIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALRSG
PDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSHHRQTM
LFSATMTEEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVTALLT
RTFQDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQTQRLESLRRFKDEQIDILVA
TDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGKAGRSVSLVGEEERKMLKEIV
KTAKTAVKARILPQDVILKFREKIENLEKDIYAVLCLEREEREMQQSEAQINKAKKQLET
GKKETGSEGVERSWFQTREERKKEKLAKALQEFDLALRGKKKRKKFVQDTQKKAQMTPEE
RSQFEILKSQMYAERLAKRNRRAKRARALPEEEPAAAPAGPKKKKKLSVFDEELTNTSRK
ALKQYRAGPSFEDRKRLGIAQRRKGGNFKSKSRYKRK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggccacgctggagagcctcggcctggtgggcaccatcgccgagggggacgtggtgccc
gtggattccgaatctggcgactccgaggatgaggaggagctgcgccggccgccgggcccc
aggcggcggggaccctccggcggggtcttcagcgccgagttcgtgttcggggaggcggag
gccggcggggaggacgcctggacggcggcgctgcggcagctccgcggcaagaaagcagct
acgacgctggatgagaagattgagaaagtgagacagaaaaggaagctccaggaaaaggaa
gctaaacaagcaaaagtgaaagatgaagatgcggaggctgaagatgatcaaaccaaaaag
gagtgtgaggattgcagtagggatgaagaagatgtggagtctgagtattcactggatgat
gaaagtatcttcgcaaaagcagacaaggtcaaagtgaaggaaaagaggagatcaaaaaag
ggagaagtggaaccagagagcttttttgaagatgcctctcaatatgatgataacttgtca
ttccaggacatgaatctttcacgacctttgctaaaggcaatcacagctcttggcttcaag
caaccaaccccaattcagaaggcttgtatcccagtgggtcttctgggaaaggatatttgt
gcttgtgctgccactgggacaggtaaaacagctgccttcatcttgcctgtcctcgagcgc
ctgatttacaaacctcgtcaagctccaataacacgtgtactggttctggtgccaacacga
gaactgggtattcaggtgcactctgtcacaaaacagctggcacagttcagcagtgtcaca
acttgcctggcagtaggtggcttggatgtgaagactcaggaagctgctctgcgctcgggg
ccagacattcttattgccactcctgggcgactgattgatcatctccacaactgcccttct
ttccacctgagcagtgttgaggtgctgattttggatgaagcagacaggatgctggatgaa
tactttgaggaacagatgaaggaaataatcaggttgtgttcccaccaccgtcagacaatg
cttttctctgccacaatgactgaggaggtgaaagatttggcttccgtttccctgaaaaat
cctgtccgaatttttgtgaacagcaacacagatgttgcgcctttcctgcggcaggaattt
atccggatcagacccaaccgggagggggaccgggaggccattgtaacagctctgctgaca
cgaacgttccaagatcatgtgatgcttttcacccagaccaagaagcaagctcaccgcatg
cacatcctgctcggactgatgggcctgcgggttggggagcttcacgggaacctctctcag
acacagcggttggaatcactcaggcgctttaaggatgagcagattgatatcctggtagct
acagatgtggctgcacgtggacttgatattgaaggtgttaaaacagtaatcaattttacc
atgcctaacaccatcaaacactatgtccaccgtgtgggtcggacagccagggcaggcaag
gctggtcgttcagtttcacttgtgggggaggaagagcgcaagatgctgaaggagattgtc
aagactgctaaaacagcagtgaaagccagaatcctcccccaagatgtcatattgaaattt
cgggagaagatcgagaatctagagaaagatatctatgcagttctgtgcttggagcgtgag
gaacgtgagatgcagcagtcagaggcccagatcaacaaggcaaagaagcagctggagaca
ggaaaaaaagagactgggagtgagggtgtggagcggagctggttccagacccgtgaggag
aggaagaaagagaaattggctaaagccctgcaggaatttgacctagcattacgagggaaa
aagaaaaggaagaaatttgtacaggacacacagaaaaaagcccaaatgacacctgaggaa
agatcacagtttgaaatcttgaaatctcaaatgtatgctgagcggctggcaaagaggaat
cgccgagcaaagagagccagagccttgccagaagaggaaccagcagcagcaccagcaggt
cccaagaagaagaagaaactgtctgtgtttgacgaagagctgaccaacacgagcaggaag
gctctgaagcagtaccgtgccggcccatcatttgaagatcgaaaacgcctgggtattgcc
cagcgcaggaaaggaggaaacttcaaatccaagtccaggtacaagagaaagtaa
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