Corvus cornix (hooded crow): 104687883
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Entry
104687883 CDS
T03546
Symbol
RPN2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00510
N-Glycan biosynthesis
ccw00513
Various types of N-glycan biosynthesis
ccw01100
Metabolic pathways
ccw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
104687883 (RPN2)
00513 Various types of N-glycan biosynthesis
104687883 (RPN2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104687883 (RPN2)
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Motif
Pfam:
Ribophorin_II
HSM3_N
DUF6571
DUF5859
Motif
Other DBs
NCBI-GeneID:
104687883
NCBI-ProteinID:
XP_039419460
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Position
20:5471766..5491142
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AA seq
670 aa
AA seq
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MARAGEGRGAGRKRRRGAGGGGIMAAPGSRLRLEAALSFLLLLASAQALVPSHRLAARDL
ARLRAVLERPFTDVRAAYYSVVGLSSLGVRVADEKAACKFIKSHVDSSSVESLFYAAQSI
QVLSGCEATISNETRELLLAAVSEDSSVTQIFHAVGALSGFGLPLASQEALSALTARLSK
EESVLATIQALETASYLSQQADLSSIVEEIEDLVARLDDLGGVYLQFEEGIETTALFVAA
AYKLSDHVGTEPAIKEDQVIQLMNAIFSKKNFETLSEAFSVARAASSLSQNRFHLPVIIV
PDGPAAVSHHQPVLRLQVTNVMSQLLTQVSVKLDQAKSVSSKATVLQQLPFTLAGDFFEL
NFMNVKPASGYYDFSISVDGDKRFIANKVELKVKVSTEVGITNVDLSTVDKDQSIAPKTT
RVAYPAKAKGSFTADSHQNFALSFQLIDVNSGAELIPHQTFVRLHNQKTGQEVVFVAEPD
SKNVYKFELDTSERKTEFDSASGTYTLYLIIGDATLENPILWNVADVVITFPEEDAPSTV
QSKNLFVPKPEIQHLFREPEKRPPTVVSNTFTALVLSPLLLLLILWIKIGANISNFSFSP
STIVFHMGHAAMLGLMYVYWTQLNMFQTLKYLAILGGITFLAGNRMLAQKAVKRIAAEQS
SRLAKYRTLR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgccggggaggggcggggcgcggggcggaagcggcgccgtggcgcgggaggg
ggcggcatcatggcggcgccgggctccaggctgcgtttggaagcggcgctcagcttcttg
cttctcctcgccagtgcccaggccctcgtccccagccatcgtctcgctgcccgtgacctg
gcgcggctgcgggctgtgctggagcggcccttcaccgacgtgcgggccgcctactactcc
gtggtgggactcagcagcctcggggtgcgggtggcggacgaaaaggctgcatgcaagttc
atcaaatctcatgtggactccagcagtgttgaatccctcttttatgctgcccagtccatc
caggtcctgtctggctgtgaggccaccatttcaaatgagaccagggagctgctgctggca
gctgtcagtgaggattcctcagtcacccaaattttccacgctgttggtgccctgagtggc
tttggccttcctttggcatcccaggaagcactgagtgctctcactgctcgtctcagcaag
gaagagagcgtgctggcaaccatccaggctttggagacggcatcttacctgtcccagcag
gcagatctaagtagcattgttgaggagatcgaggaccttgtcgctcgcttggatgacctg
ggtggagtttacctacaatttgaagaaggaattgagactactgctctgtttgttgctgct
gcctataagctgtcagaccatgtgggtacagagccagcaataaaggaggatcaagttatc
cagctgatgaatgcgatttttagcaagaaaaactttgagacactctcagaggccttcagt
gttgctcgtgctgcaagttccttatcccagaaccgcttccacttgcctgtcatcattgtc
cctgatgggcctgcagctgtgtctcatcatcagcccgtactcaggctgcaagtgaccaat
gttatgtcccagctactgactcaagtttctgtaaagcttgaccaagccaagtctgtgtct
agcaaagccactgtccttcaacagctaccatttactctcgctggagatttctttgagctg
aacttcatgaatgtgaaacctgcaagtggatattatgatttctctatcagtgtagatgga
gataagcgatttattgctaacaaagtggagctgaaagtaaaagtttccacagaagtgggg
attactaatgtagatctttctaccgtggataaagatcagagcattgcaccaaaaacaacc
agggtagcttacccagccaaagccaagggctcattcactgctgacagccatcagaacttt
gctttatccttccagctgatagatgtgaacagtggagctgaactcatccctcaccagact
tttgtccgacttcacaaccaaaagactggccaggaggtggtgtttgttgcagaaccagac
agcaagaatgtgtacaagtttgaactggatacctctgaaagaaagactgaatttgactct
gcctctgggacctacactctttacctgatcattggagatgccactctggaaaatccaatc
ctgtggaatgtggctgatgttgtgatcacgttcccagaagaggatgcaccatccacagtc
cagtccaagaacctctttgttcccaaacctgaaatccagcacctcttcagggaacccgag
aagaggcctcccacagtggtgtccaacactttcacagcgttggttctctccccactgctt
ttgctgctcatcctgtggatcaagataggtgccaacatctccaacttcagcttttctccc
agcaccattgtttttcacatgggacatgctgcaatgttgggactcatgtatgtctactgg
actcagctcaacatgttccagactctgaagtacttggccattttgggtggcatcacattc
ctggcaggcaacaggatgctggctcagaaagctgtgaagcggatcgctgcagagcagagc
agtaggttggcaaagtatagaacgctgcggtaa
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