Corvus cornix (hooded crow): 104688243
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Entry
104688243 CDS
T03546
Symbol
TRIM32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104688243 (TRIM32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104688243 (TRIM32)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104688243 (TRIM32)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104688243 (TRIM32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-B_box
zf-C3HC4_2
Baculo_IE-1
FAM184
zf-RING_4
zf-C3HC4_4
OmpH
zf-RING_11
FYVE
TRAF3_RING
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-GeneID:
104688243
NCBI-ProteinID:
XP_010395948
LinkDB
All DBs
Position
17:complement(7787654..7795368)
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AA seq
647 aa
AA seq
DB search
MAAAPHLNSDALREVLECPICMESFTEEHLRPKLLHCGHTICKQCLEKLLANSINGIRCP
FCSKITRITSLAQLTDNLTVLKIIDTAGLGEVVGLLMCKVCGRRLPRHFCKSCSLVLCEP
CKEASHMPQGHRVIAIKEAAEERRREFGTRLARLRELMGDLQKRKAALEDVSRDLQSRYK
AVLQEYSKEERKIQEELARSRKFFTTSLSEVEKINNQVMEEQAYLLNLAEVQIMSRCDYF
LAKIKQGDIALLEEAADEEEPELTNSLPRELTLQEVELLKVSHVGPLQIGQVVKKPRTVN
VEESLMETAASSFVPFREPDLVQEEPSCTPHSSPAKPRMPEAATSIQQCSFIKKMGSKGS
LPGMFNLPVSLHVTSQGEVLVADRGNFRIQVFTRKGFLKEIRRSPSGIDSFVLSFLGADL
PNLTPLSVTMNCHGLIGVTDSYDNSVKVYTMDGHCVACHRSQLSKPWGITALPSGQFVVT
DVEGGKLWCFTVDRGMGVVKYSCLCSAVRPKFVTCDAEGTIYFTQGLGLNLENRQYEHHL
EGGFSIGSVGPDGQLGRQISHFFSENEDFRCIAGMCVDARGDLIVADSSRKEILHFPKGG
GYNILIREGLTCPVGIAITPKGQLLVLDCWDHCIKIYSYHLRRYSTP
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcccctcatctcaactcggacgcgctccgagaggtcctggagtgccccatc
tgcatggagtccttcaccgaggagcacctgaggcccaagctcctgcactgtgggcacacc
atctgcaagcagtgcctggagaagctcctggccaacagcatcaacgggatccggtgcccc
ttctgcagcaagatcacgcggatcaccagcttggcccagctcaccgacaacctcaccgtg
ctgaagatcatcgacacagccggcctgggggaagtggtgggacttctcatgtgcaaggtc
tgcgggaggaggctgccaagacacttttgcaagagctgtagcttggttttgtgtgagcca
tgcaaggaggcttcgcacatgccccaaggacacagagtcattgctatcaaagaggctgct
gaggagcgtaggagggaatttgggaccaggcttgccaggcttcgagagctcatgggtgat
cttcagaaaaggaaagctgctctagaggatgtttcaagagacctgcaatccagatacaaa
gcggttctgcaggagtacagcaaagaggagcgcaagatccaggaagagctggccaggtca
cgcaagttcttcaccacctctttgtctgaagtggagaagataaataaccaggtgatggag
gagcaagcttacctactgaacttagcagaagtgcagataatgtctcgctgtgactatttc
cttgccaaaataaagcagggagatatagctctcctggaggaggcagcagatgaggaagaa
ccagaactgacaaacagtctcccgagggagctgactctccaagaggtggaactccttaag
gtgagccatgtgggaccactgcagatcgggcaggtggtgaagaaaccccggacagttaac
gtggaggaatcgctcatggaaaccgcagcatcctcctttgtaccatttcgggagcctgac
ttggtgcaggaggagcccagctgcaccccccattcctcgccagccaagccaaggatgcct
gaagcagccacgagcatccagcagtgttccttcatcaagaagatgggctccaagggcagc
ctgccagggatgttcaacctccccgtcagcctgcacgtcaccagccaaggcgaggtcctc
gtggcagaccggggcaacttccgaatccaggtttttacccgcaaaggcttcctgaaggag
atccgccggagccccagcggcatcgacagcttcgtgctgagtttccttggagcagacttg
cccaacttgacccccctttctgtcaccatgaactgccacgggctgatcggtgtgacagac
agctacgacaactctgtcaaggtgtacaccatggatggccactgcgtggcgtgtcaccgg
agccagctgagcaagccctggggcatcaccgcgctgccctcgggccagttcgttgtcacc
gacgtggaaggggggaagctctggtgcttcactgtggaccgtggcatgggggtggtgaag
tacagctgcctgtgcagtgccgtgcgccccaagtttgtcacctgcgacgctgaagggacc
atttacttcactcaggggctggggctcaacctggagaaccggcagtacgagcaccactta
gaaggaggcttctccatcggctccgtcggcccagatgggcagctgggacgccagatcagc
cacttcttctccgagaatgaggatttcaggtgcattgctgggatgtgcgttgatgccagg
ggagacctgatcgttgctgacagcagtcgcaaggaaatcctgcattttcctaaaggaggc
ggctacaacatcttaatccgggagggactcacctgcccggtgggcattgccattactccc
aaagggcagctgctggtgctggactgttgggatcattgcattaagatctacagttaccac
ctgagaagatactccaccccttaa
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