Corvus cornix (hooded crow): 104689531
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Entry
104689531 CDS
T03546
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03013
Nucleocytoplasmic transport
ccw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104689531 (THOC3)
09122 Translation
03013 Nucleocytoplasmic transport
104689531 (THOC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104689531 (THOC3)
03041 Spliceosome [BR:
ccw03041
]
104689531 (THOC3)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104689531 (THOC3)
Spliceosome [BR:
ccw03041
]
Complex C
Other components
EJC/TREX
104689531 (THOC3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104689531 (THOC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
RMC1_N
NBCH_WD40
PD40
Coatomer_WDAD
Peptidase_S9_N
Nup160
Cytochrom_D1
YNCE
PROPPIN
DPPIV_N
DUF359
Motif
Other DBs
NCBI-GeneID:
104689531
NCBI-ProteinID:
XP_039415401
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All DBs
Position
13:3987930..3991388
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AA seq
323 aa
AA seq
DB search
MALSPYVQAMQELFRANTRSREFPAHGAKVHSVAWSCCGRRLASGSFDKTASVFLLEKDR
LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINIC
WSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI
LSYPELKPIQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWP
VRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAFACDD
KDGKYDSSREAGTVKLFGLPNDS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtcgccctacgtgcaggccatgcaggagctgttccgcgccaacacgcggagc
cgcgagttcccggcgcacggtgccaaggtgcactcggtagcctggagctgctgcggccgc
cgcctcgcctccggctccttcgacaagaccgccagcgtcttcctgctcgagaaggaccgg
ctggtgaaggagaacaactaccggggtcacggggacagcgtggatcagctctgctggcac
cccagcaaccctgacctcttcgtcacagcgtcaggggacaaaaccatccgcatctgggac
gtccgcaccaccaagtgcatcgccactgttaacaccaaaggtgagaacatcaacatctgc
tggagccccgatggacagaccatcgccgtggggaacaaggatgacgtggtcaccttcatt
gatgccaagacacatcgctccaaagctgaggagcagtttaagtttgaagtgaacgagatc
tcctggaacaacgataacaacatgttcttcctcaccaatgggaacggctgcatcaacatc
ctcagctacccagagctgaaacccatccagtccatcaatgcacatccttccaactgcatc
tgcatcaagttcgatcccatgggaaaatattttgccacaggcagtgctgatgcgttggtc
agcctctgggatgtggatgagctggtgtgtgtgagatgcttctccaggcttgactggcct
gtgcggacgctgagctttagccatgatgggaagatgctggcctcagcatcagaagatcac
ttcattgacattgccgaggtggagacaggagagaagctctgggaggtgcagtgtgagtcc
cccaccttcacagtggcctggcacccgaagaggccgctgctggcctttgcctgtgacgac
aaagatggcaaatacgacagcagcagggaggctggcactgtcaagctcttcgggctcccc
aacgactcctga
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integrated database retrieval system