Corvus cornix (hooded crow): 104694392
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Entry
104694392 CDS
T03546
Symbol
SPHK1
Name
(RefSeq) sphingosine kinase 1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00600
Sphingolipid metabolism
ccw01100
Metabolic pathways
ccw04020
Calcium signaling pathway
ccw04148
Efferocytosis
ccw04370
VEGF signaling pathway
ccw04371
Apelin signaling pathway
Module
ccw_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
104694392 (SPHK1)
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
104694392 (SPHK1)
04371 Apelin signaling pathway
104694392 (SPHK1)
04020 Calcium signaling pathway
104694392 (SPHK1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104694392 (SPHK1)
Enzymes [BR:
ccw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
104694392 (SPHK1)
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Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
Motif
Other DBs
NCBI-GeneID:
104694392
NCBI-ProteinID:
XP_039418400
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Position
18:complement(4504826..4511964)
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AA seq
517 aa
AA seq
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MAAGRRAPPEPGGGPVLLQGIFGAGPGPGAAACSLSLTARELQVRRAGGCPGGSAGPDAA
LRLADCVGSAAFPAAAAAACFSLVCYPLRGPRWGPPARQRLERTFRVSRGPDAEGNLRIA
QAWSRRIRELAVPTVPAQDGDSYGVLPRPCHALVLLNPQSGSGRALDDFQAVVQPMLAEA
DIATTVFVTERPHHAHEKVRDEDLSQWDTLVVMSGDGLLFEVVNGLMERPDWKEAMKKPL
CILPGGSGNALAASINYYAGYDHVAKKKLLTNCTFILCKGLYTQMDLVSLSTASGKRFFS
FLGFGWGFISDVDIDSEKYRWLGSARFTLGTLQCLAKLRVYQGRLSYLPMATEQGSSPAP
RDPHAPVTNGHIPQPAGTEAPGSPPPDSLLVPLGQPVPAHWTVVPEEEFVLVYAIYQSHL
GTNLLMAPAARLHDGCIHLFYMKAGISRVTLLKLFLAMSRGTHLDLNCPHLCYVPVRAFR
LEPRVAAGIMTVDGEALACEPVQGQVHTRLCRVLSGS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggccgccgcgctcccccggagcccggcgggggcccggtgctgcttcaaggc
atcttcggcgcggggccgggccccggtgccgccgcctgctcgctgtccctgacggcccgg
gagctgcaggtgcggcgtgccggcggctgcccgggcggctcggccggtcccgacgccgcg
ctccgcctggccgactgcgtgggctcggccgccttccccgcggccgcggccgccgcctgc
ttctcgctggtgtgttacccgctgcgggggccgcgctgggggccgcccgcccgccagcgc
ctggagcggaccttccgcgtctcccggggtcccgatgccgagggcaacctgcgcatcgcc
caggcctggagccgccgcatccgcgagctcgccgtgcccaccgtgcccgcgcaggacggt
gacagctatggggtgctgccccggccctgccacgcgctggtgctgctgaacccacagagc
ggctccggccgtgccctcgatgacttccaggcagtggtgcagcccatgctggccgaggcc
gacattgccaccactgtcttcgtcaccgaaagaccccaccatgcgcatgagaaggtgcga
gatgaggacctgtcacagtgggacacgctggtggtcatgtctggggatgggctgctgttc
gaggtggtgaacggactcatggagcgtccggactggaaggaagccatgaagaagccactg
tgcatcctgccaggaggctctgggaatgccctggcagcctccatcaactactatgcaggc
tacgaccacgtcgccaagaaaaagctgctgacgaactgcaccttcatcctgtgcaagggg
ctgtacacgcagatggacctggtatctctgagcacggcctcgggcaagcgcttcttctcc
ttcctgggctttggctggggcttcatctcggacgtggacatcgacagcgagaagtaccgc
tggctgggcagcgcccgcttcaccctgggcaccctgcagtgcctggccaagctcagggtg
taccagggccgcctgtcctacctgcccatggccacggagcagggcagctccccggcaccc
cgggacccccacgcgcccgtcaccaatggccacatcccgcagccggcggggacggaagcg
cccggctccccgccccccgactcgctgctggtgccgctgggccagcccgtgcccgcgcac
tggaccgtggtccccgaggaggagtttgtcctggtctatgccatctaccagtcccacctg
ggcaccaacctgctgatggcaccggcggcccggctgcacgatggctgcatccacctcttc
tacatgaaggccggcatcagccgcgtgacgctgctgaagctcttcctggccatgtccagg
gggacccacctggacttgaactgtccccacctgtgctacgtccccgtccgggcgttccgc
ctggagccgcgggtggccgcgggcatcatgacagtggatggggaggcgctggcctgcgag
cccgtgcagggccaggtccacacccgcctctgccgcgtcctcagcggctcctga
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