Corvus cornix (hooded crow): 104695142
Help
Entry
104695142 CDS
T03546
Symbol
USP1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1 isoform X1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104695142 (USP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccw01002
]
104695142 (USP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104695142 (USP1)
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104695142 (USP1)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104695142 (USP1)
Peptidases and inhibitors [BR:
ccw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104695142 (USP1)
Ubiquitin system [BR:
ccw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104695142 (USP1)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
104695142 (USP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
104695142
NCBI-ProteinID:
XP_039412276
LinkDB
All DBs
Position
8:complement(2418776..2430693)
Genome browser
AA seq
787 aa
AA seq
DB search
MPGVLPGDSARASPSKKNRLSLKLFQKKETKRALDFTEAQENEQKGAEFRGAEIDQVVPA
AQPPSLVSCEKKDNMLPFVGLNNLGNTCYLNSVLQVLYFCPGFKTGVKHLYNIISKKRES
SKDEGEQKAEKGSCKEDPLASYELICSLHSLILSVEQLQASFLLNPEKYTDELATQPRRL
LNTLRELNPMYEGYLQHDAQEVLQCILGNIQETCQLLKKEELNKLPVEEPAAKLEEKPNQ
NSESNGPVSPAEEEDPSSGSHGGDAAEEKLLKGNGKRKSDAEGGNAKKKSKVSKEQMAAE
ENQRQTRSKRKATGEKMENQTDPIAKCSGESDSTKPTQKKSRLRLNWLKSSCKQPSILSK
FYSLGKLTTNLGSKDPGKEYDCEFEESAVKCENGDSKEEYHEPASPMESHHGKGTEREPK
KEGTELAVFELVEKLFQGQLVLRTRCLECECFTERREDFQDISVPVQEDELSKTEESSEI
SPEPKTEMKSLKWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVITIHLKC
FAASGLEFDCYGGLSKINTPLLTPLRLSLEEWSTRPTNDTYGLFAVVMHSGITISSGHYT
ASVKVTDLQSLELDRGNFLPEPGYAALKPEPLNEEEARAVAEDYDDGEVSFRLNGAAPPG
KVLSKKNMEAVGLLGGQKSKSDCDLYVSKQPNPEKFLSTAPEPRSAEPSGSAEPRAEQGE
PPALAAHGLENKALYVLQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLSPTSSSTSTPYLL
FYKKIVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgtcctgcccggcgacagcgccagggccagcccctccaagaagaacaggctg
tcgctgaagctctttcagaagaaggagacgaagcgagcgctggatttcaccgaggcgcag
gaaaatgagcagaagggcgcggagttcagaggcgccgagattgaccaggtggttcctgca
gcacagcccccctcccttgtcagctgtgagaaaaaagacaacatgttgccttttgtgggc
ttgaacaacctgggcaacacctgctacctgaacagtgtcctgcaggtattatatttttgt
cctggttttaaaactggagtaaaacatttatataacattatttcaaagaagagagaatct
tcaaaggatgaaggagagcaaaaggcagaaaagggaagttgtaaagaagatcccctggca
agttacgaactcatctgcagtttgcactccttgatcctttcagttgagcagcttcaagcc
agttttctcctaaacccagaaaaatacacggatgaattggccactcagccccggaggctg
ctgaacaccctcagagagctgaaccccatgtacgaagggtacctgcagcacgatgcccag
gaggtcctgcagtgtatcctggggaacatccaggaaacctgccagctgctgaagaaggaa
gagctgaacaaactgcctgtggaagagcctgcagctaaactggaggaaaaacccaaccaa
aactctgagagcaacggccctgtcagccctgctgaggaggaggatcccagctcgggcagc
cacggcggagacgcggccgaggagaagctgctcaagggaaacgggaaaaggaaaagcgac
gccgagggtgggaacgccaagaaaaaatccaaagtatcaaaagagcaaatggcagcagaa
gaaaatcaaagacaaaccaggtccaagaggaaagccacgggagaaaagatggaaaaccaa
acggatcccattgccaagtgttccggggagagcgacagcaccaagcccacgcagaaaaag
tcgcgccttaggttaaactggttaaaatcttcctgcaaacaacccagtattctgtccaaa
ttttacagtctaggaaagttaactacaaacttgggatccaaagacccagggaaggaatat
gactgtgagttcgaagagtcagctgtcaagtgtgaaaatggtgacagtaaagaagaatat
catgaaccagcgtctcccatggaaagccatcatggaaaaggaactgaaagagaaccaaaa
aaggaaggtacagagctggctgtctttgagctggtggagaaactcttccagggccagtta
gtgctgaggacgaggtgcttggagtgcgagtgcttcacggaaaggagggaagattttcag
gacatcagtgtcccagtgcaagaagatgaactttctaaaactgaagagagttctgaaatt
tctccagagccaaaaacagaaatgaagagtctgaaatgggcaatttcccagtttgcctca
gtggagaggattgtgggagaggacaaatatttctgtgagaactgccaccactacacggaa
gccgagcgcagccttttgttcgataaaatgcccgaagtgatcacaattcacttgaagtgc
tttgctgccagtggcttggagtttgactgctatgggggcctgtccaagatcaacacgccc
ctgctgacacccctgaggctgtccctggaggagtggagcacccggcccaccaacgacacc
tacgggctctttgccgtggtcatgcacagcggcatcaccatcagcagcggtcactacacg
gcctcagtgaaggtcacagacctgcagagcctggagctggacaggggcaacttcctcccc
gagcccggctacgccgccctcaagccggagccgctcaacgaggaggaggcgcgggccgtg
gccgaggactacgacgacggagaggtctccttcaggctcaacggcgccgcgccgccgggg
aaggtgctcagcaagaagaacatggaggccgtgggactgctcggggggcagaagagcaag
tctgactgcgacctgtacgtcagcaaacagcccaaccccgagaagttcctcagcacggct
cccgagccccgcagtgccgagcccagcggcagcgccgagcccagggcagagcagggcgag
cccccggcgctggcagcacacggactggaaaacaaagctctctacgtgctccagagcctc
aaggagtacgaggggaagtggctgctcttcgatgattccgaagtgaaggtcacagaggaa
aaggactttctgaattctctttctccgacatcgtcatctacatcaactccttacctactg
ttttataagaaaattgtagagtga
DBGET
integrated database retrieval system
