Corvus cornix (hooded crow): 104696644
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Entry
104696644 CDS
T03546
Symbol
SRF
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104696644 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104696644 (SRF)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
104696644 (SRF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
104696644
NCBI-ProteinID:
XP_039425243
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Position
3:557406..572997
Genome browser
AA seq
554 aa
AA seq
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MLPSQAGAGNGAAAALARGSGLGRSPVPRGANGGGAAAGAPGGRLEREALYSGSEGDSES
AEEEELGGERRGVKRGLAEAAAAAAAAGPAAGAAAAAAYSGGGGGGAVSGAKPGKKTRGR
VKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ
PMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSSGETKDAL
KPAFTVTNLPGTTSIQTAPTTSTSMQVSSGPSFPITNYLAPVSASISPNAVTSANGTVLK
TTGASAVTSGGLMPIPTGFTLMSGASLSPGTPTIPLTQLQPHSLALSSQQGQVVMGTAGQ
LQQAQQTVFHFPARAGGQIVSLTGGTMAQQVPVQAIQVHQAPQQTSPSSDSSTDLTQTSS
SGTVTLPATIMTSSVPTTVGGHMMYPSPHAVMYAPTSGLADGGLAVLNAFPQAPSAMQVS
HGQVQDQGGVPQVFLTAPSGTVQIPVSAVQLHQDKWTYQAQCCDDQSKDRSRPREHHRKP
RHKKEVLVVNGEGK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgagccaggccggggccgggaacggcgccgccgccgcgctggcccgcggctcg
gggctgggccggtcgccggtgccgcgtggggcgaacggcggcggggcggcggcgggggcg
cccgggggccgcctggagcgggaggcgctgtacagcggcagcgagggcgactcggagtcg
gccgaggaggaggagctgggcggcgagcggcgcggcgtgaagcgtggcctggccgaggcg
gcggcggcggcggcggcggcggggcccgcggcgggagcggcggcggcggccgcctacagc
ggcggcgggggcggcggggccgtgagcggcgccaagcccgggaagaagacgcggggccgg
gtgaagatcaagatggagttcatcgacaacaagctgcggcgctacaccacctttagcaag
aggaagaccggcatcatgaagaaggcctatgagctctccacgctgactggcactcaagtc
ctgctgttggtggccagcgagacaggccatgtgtacacgtttgccacacggaagctgcag
cccatgatcaccagtgagacggggaaggcgttgatccaaacatgcctcaattccccagac
tcgcccccacgctcggaccccaccactgaccagcgcatgagtgccactggttttgaggag
acagacctcacctaccaggtgtctgaatcagacagcagcggggagaccaaggatgccctg
aaacccgcgttcaccgtcaccaacctgccgggaacaacgtccatccagacagccccgacc
acctcgacctccatgcaggtcagcagtggcccgtcattccccatcactaattacctggcg
ccagtgtctgccagcatcagccccaatgccgtcaccagtgccaacgggacagtgctgaag
actactggagccagtgcagtgacgtctgggggcctcatgccgatacccactggcttcacc
ctcatgtcaggtgcttccctttctccggggacccctaccattcctctcactcagttacag
ccgcactccctggctctttccagccagcagggccaggtggtcatgggtacagctggacag
ctgcagcaggcacagcagacagtcttccacttccctgccagagctggagggcagattgtg
tcgctgacaggtggtaccatggctcagcaggttccagtccaggcaatccaggtgcaccag
gcaccgcagcaaacgtctccctctagtgacagcagcactgaccttacccagacctcttcc
agcggaacagtgaccctcccagcgaccatcatgacgtcgtctgtgccaaccaccgtgggc
ggccacatgatgtaccccagcccgcacgcggtgatgtacgcgcccacctccggcctcgcc
gacggcgggctcgcggtgctcaacgctttcccacaggcaccctcagcgatgcaggtgtcc
cacggccaggtccaggatcagggtggcgtcccccaggtgttcctgacggccccatcaggc
acggttcagatcccagtctcagctgtccagcttcaccaggataaatggacctaccaagca
cagtgttgcgacgatcagagcaaagacagaagcaggccacgtgaacaccacagaaaacct
cgtcacaaaaaagaagtcttggtagtgaatggggaaggaaaatga
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