KEGG   Corvus cornix (hooded crow): 104696644
Entry
104696644         CDS       T03546                                 
Symbol
SRF
Name
(RefSeq) serum response factor isoform X1
  KO
K04378  serum response factor
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04010  MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    104696644 (SRF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccw03000]
    104696644 (SRF)
Transcription factors [BR:ccw03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box responders to external signals
    104696644 (SRF)
SSDB
Motif
Pfam: SRF-TF
Other DBs
NCBI-GeneID: 104696644
NCBI-ProteinID: XP_039425243
LinkDB
Position
3:557406..572997
AA seq 554 aa
MLPSQAGAGNGAAAALARGSGLGRSPVPRGANGGGAAAGAPGGRLEREALYSGSEGDSES
AEEEELGGERRGVKRGLAEAAAAAAAAGPAAGAAAAAAYSGGGGGGAVSGAKPGKKTRGR
VKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ
PMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSSGETKDAL
KPAFTVTNLPGTTSIQTAPTTSTSMQVSSGPSFPITNYLAPVSASISPNAVTSANGTVLK
TTGASAVTSGGLMPIPTGFTLMSGASLSPGTPTIPLTQLQPHSLALSSQQGQVVMGTAGQ
LQQAQQTVFHFPARAGGQIVSLTGGTMAQQVPVQAIQVHQAPQQTSPSSDSSTDLTQTSS
SGTVTLPATIMTSSVPTTVGGHMMYPSPHAVMYAPTSGLADGGLAVLNAFPQAPSAMQVS
HGQVQDQGGVPQVFLTAPSGTVQIPVSAVQLHQDKWTYQAQCCDDQSKDRSRPREHHRKP
RHKKEVLVVNGEGK
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgttgccgagccaggccggggccgggaacggcgccgccgccgcgctggcccgcggctcg
gggctgggccggtcgccggtgccgcgtggggcgaacggcggcggggcggcggcgggggcg
cccgggggccgcctggagcgggaggcgctgtacagcggcagcgagggcgactcggagtcg
gccgaggaggaggagctgggcggcgagcggcgcggcgtgaagcgtggcctggccgaggcg
gcggcggcggcggcggcggcggggcccgcggcgggagcggcggcggcggccgcctacagc
ggcggcgggggcggcggggccgtgagcggcgccaagcccgggaagaagacgcggggccgg
gtgaagatcaagatggagttcatcgacaacaagctgcggcgctacaccacctttagcaag
aggaagaccggcatcatgaagaaggcctatgagctctccacgctgactggcactcaagtc
ctgctgttggtggccagcgagacaggccatgtgtacacgtttgccacacggaagctgcag
cccatgatcaccagtgagacggggaaggcgttgatccaaacatgcctcaattccccagac
tcgcccccacgctcggaccccaccactgaccagcgcatgagtgccactggttttgaggag
acagacctcacctaccaggtgtctgaatcagacagcagcggggagaccaaggatgccctg
aaacccgcgttcaccgtcaccaacctgccgggaacaacgtccatccagacagccccgacc
acctcgacctccatgcaggtcagcagtggcccgtcattccccatcactaattacctggcg
ccagtgtctgccagcatcagccccaatgccgtcaccagtgccaacgggacagtgctgaag
actactggagccagtgcagtgacgtctgggggcctcatgccgatacccactggcttcacc
ctcatgtcaggtgcttccctttctccggggacccctaccattcctctcactcagttacag
ccgcactccctggctctttccagccagcagggccaggtggtcatgggtacagctggacag
ctgcagcaggcacagcagacagtcttccacttccctgccagagctggagggcagattgtg
tcgctgacaggtggtaccatggctcagcaggttccagtccaggcaatccaggtgcaccag
gcaccgcagcaaacgtctccctctagtgacagcagcactgaccttacccagacctcttcc
agcggaacagtgaccctcccagcgaccatcatgacgtcgtctgtgccaaccaccgtgggc
ggccacatgatgtaccccagcccgcacgcggtgatgtacgcgcccacctccggcctcgcc
gacggcgggctcgcggtgctcaacgctttcccacaggcaccctcagcgatgcaggtgtcc
cacggccaggtccaggatcagggtggcgtcccccaggtgttcctgacggccccatcaggc
acggttcagatcccagtctcagctgtccagcttcaccaggataaatggacctaccaagca
cagtgttgcgacgatcagagcaaagacagaagcaggccacgtgaacaccacagaaaacct
cgtcacaaaaaagaagtcttggtagtgaatggggaaggaaaatga

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