Corvus cornix (hooded crow): 104698044
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Entry
104698044 CDS
T03546
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104698044 (CHD6)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104698044 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
104698044
NCBI-ProteinID:
XP_039419587
LinkDB
All DBs
Position
20:577254..669681
Genome browser
AA seq
2843 aa
AA seq
DB search
MRWKGRSRRAGPRARPSHRGSVPLRAEQTRIRCDTAAMSQQRHRRHGGAASRRSRRARCV
SVAAPWGSRVLASGVHWRWRWILALINELPSLKALSLSSMSSAWECKTQDTFASSEEQDK
VPHQVTVTATNTGGQCQCPKEEPNGAPQKRTSTQNGMQDSGGTGVKKKRKKKDLAEQEEG
DKAAVEVKPKRRREPKEPKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSG
SEPAPRSRPKKSSKDTPVEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQK
RRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIE
KILASRMVQKEAHPGGLAFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNK
QAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWEL
EEDVDPGKIKEFEALQIPPEIKHMVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGM
NWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFR
TWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKK
IQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQF
PSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKK
YYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHCPE
APDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERI
DGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQA
QARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSK
MEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVAS
GNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFS
ELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKD
MEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGSLSAPVPRGRKGKK
TKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAA
DKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCF
LEKVGMPDEKLLSAEQGVSDGAQDAAERGSMEKEESSGEKLEGLSKQEDIVAAGVGEASE
KRDEPAAAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPPRAEMLVPGNHGYWL
QDEMFRRASEMDSVNKEMQKRWTRREQADFYRTVSSFGVIYDQEKKVFDWAQFRAISRLE
KKTDESLEKYFYSFVAMCKNVCGLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKV
REQVLKCPQLHERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSF
LDAYRNYAQHKRTGLPGPETLCCLYQSNSKLYSSPLYSQMDQTCETLENEAESQIKLETV
DSTMSQAGGSPADTNCETFMSEVRDIISSTYDESSLPDSLVCMMYDEKACPSEQSSLARD
SPNCTDVGSSVAKLSEGKLEGDEDPSSCDADAMREAPFLEGLQVCSDRMDSQNEEAEPSP
STPGSNPSQSAAAKLGKGLEQKGALASPAAGLPEHGTMERVLSVGLYSPSLHNYELKVPP
EQRFISLLQEKGMEAKSGPSQSHSEEDEEEEEDDDNSETAADTVEGLNGPRTRADCGPEA
HELGGEEQSSGLPTPEDTCPEDVNGERESLGLGEPCAEGREDCGSNEESTRQHSPGQAQS
QPFSLPTPLPQGGPQGAEPLCVRGEPLGQAAEGQTGCTEAPHPEPQGIKQEKCDNRDDGE
KASSNQSKDGPEKYLEEENKNSASVLPGEIDDLQDARAPTIAQLLQEKTLYSFSEWPKDR
VIINRIDNICHAILKGKWPSSSQQFEAQSLLTAPAMASSAGSRSSFAESEATDPSFNNGV
LMSRVQKEGFLSPAFAKDERKHRRPYEFEMERDAKQRSLEQLAAAHVHPPIVLNGWREAA
VDLSRASDGSPGNSSPFPLNTNMPKLGTVNALQSSLGMDLSGILQAGLIHPVTGQIVNGS
LRRDDAAMRRRRGRRKNVEGMDLIFLKERPLPNRLQDVQEDQPQPPQNSPLPDGPVAATS
APQPVPAAGSQEKAVPNKSLLDWLRQQSDYTLDVPSFGTVAVPEGSDPRETWCSISVLGT
AERGRKHSTAELNFSDKPKQRRQRCKDPNKLDISSLTGEERVPVVHKGTGRRLGGATAPA
LKELPRWLDANLEYAVAADWADIVKLSGYLPENKFNRILTEPVLRDAGPRRRGRRPRSEL
LKGPGVVADSSSGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVGFPAGFAAVPAGED
VKSTLSMLPMMLPGMATVPQMFGVGGLLNSPMTTTCTATAPTSLTSTTKGGTASAEKANE
EKQGSQDGKKEPLAEDKPGPSSFSNQTESAITTSSPVAFNPFLIPGMSPGLIYPSMFLSP
GIGMALPGIQQTRHSEAANLESQKRKRKKAKGELANPEPETVSLPEKEAANSQNCVEQSP
PAAAEKEQDGPAEEEHQAAHDTD
NT seq
8532 nt
NT seq
+upstream
nt +downstream
nt
atgcggtggaagggccgctcccgccgcgccgggccgcgggctcgtccctctcaccgcggt
tccgtcccgctgcgcgcggagcagacgcggatccgttgtgacaccgcagccatgtcacaa
cagaggcatcgcaggcacggcggagccgcgtctcgccgcagtcgtcgcgcccgctgcgtg
tctgtggcagcgccgtggggctcccgtgtgctcgccagtggcgttcactggcgatggagg
tggatattagccttgatcaatgagctgccaagcttaaaagcactgagcctctcctcaatg
tcgtctgcctgggagtgcaagacacaggacacctttgccagcagtgaagagcaggacaag
gtgccccaccaggtgacagtgacagccacaaacacaggtggccagtgccagtgcccaaag
gaagagcccaacggggctccccagaagcggacaagcacccagaacgggatgcaggacagt
gggggcacgggggtgaagaagaaacggaagaaaaaggatctggcagagcaggaagaggga
gataaagcagctgtggaggtgaaaccaaagaggaggagagagcctaaagaaccaaaagag
cctaaaaaggtgaaggagtccaagaagccgaaggagcccaagcagagggaggtggctaag
aagccccggaaacctcgggaacccaaagccccaaaggagcctaaagacaagaagagtggc
tctgagccagcccccagatcaagacccaagaagagcagcaaagacacccccgtggagaag
aagaagaaagggaagaggaaaaatgagataccagtgaacagtttggatttggatcaggat
ctcctgagcccatctgtacagagcccagaggagtctgcagagtcagctgacagccagaaa
cgacgctctggacggcaggtgaagaggaggaagtacaacgaggacttggatttcaaggtt
gtggatgatgacggcgagacaattgccgtgctgggagctgggcgaacctccgcgctctcc
gcctctactctggcgtggcaggcagaggagcctcccgaggatgatgccaatatcattgag
aagatccttgcctccaggatggtgcagaaggaggctcatcctggaggcctggcatttgag
acagaggagttctacgtcaagtacaggaacttctcttacctccactgtaaatgggcaacg
ctggaggagctggagaaggaccccaggatctcgcagaagataaagcgcttccggaacaag
caggctcagatgaaacatatttttacagagcctgatgaagatttgttcaacccggactat
gtggaggtagatcgaattctggaggtggctcacacaaaggaccctgacactggggaggag
gtgactcactacctggtgaagtggtgctcactgccctatgaggagagcacctgggagctg
gaggaggatgttgacccagggaagattaaagagtttgaagccctccaaatccctccagaa
atcaagcacatggtaacgtaccctgaggagcgcccagcatccgagtcctggcagaaactg
gagaagtcccgggagtacaagaacagcaaccaactgcgggagtatcagctggagggaatg
aactggctgctctttaactggtataacaggaagaactgcatcctggctgacgagatgggg
ttggggaagacaatccagtcaatcaccttcctctcagagatattcctgatgggcatccat
ggccccttcctcatcatcgcacctctctccaccatcacgaactgggagagggagttccgt
acctggacggagatgaacgccatcgtgtaccacggcagccagatcagccggcagatgatc
cagcagtacgagatggtgtacagggacacacagggtaaccctctccctgggatcttcaag
ttccaggtggttatcaccacctttgagatgatccttgctgactgcccggagctgaagaag
atccagtggcgctgtgtggtcattgacgaggcacatcgcctgaagaacaggaactgcaag
ctcttggaggggctgaagctcatggccctggaacacaaggtgctgctgacagggacccct
ctgcagaactcggtggaggagctcttcagcctcctaaattttctggagccacagcagttc
ccctcagagacagctttcctggaagagtttggagacctgaagacagaggagcaggtgaag
aagctgcagtccatcctgaagcccatgatgctgcgacggctgaaggacgatgtagagaag
aatctggcacccaaacaggagaccatcattgaggtggagctgaccaatatccaaaagaaa
tactaccgggccatcctggagaagaatttctccttcctctccaagggtgccaaccagcac
aatatgcccaacctcatcaataccatgatggagctgcgcaagtgctgcaatcacccgtac
ctcatcaatggggcagaggagaagatcctggaagacttccgtaaaacacactgcccagag
gcaccagacttccagctgcaggcgatgatccaggcagctgggaagctggtgctcattgat
aagctgcttcccaagctgatcgctggtgggcacaaggtgctcatcttctcacagatggtg
cgctgccttgacatcctggaagactatctcatccaaagacggtacacctatgagcgcatc
gatgggcgggtgcgtggcaacctgcgccaggctgccattgaccgcttctgcaagcccgac
tcggatcgctttgtgtttctcttgtgcacgcgggcgggcgggctgggcatcaacctgacc
gctgccgacacctgcatcatcttcgattccgactggaacccacagaatgacctgcaggct
caggctcgttgccaccggattgggcaaagcaaggcagtgaaggtctatcgcctcatcacc
aggaactcctacgagcgggagatgttcgacaaggccagcctgaagctgggcctggataaa
gccgtgctgcaggacattaaccgcaagggcagcaccaatggggttcagcagctctccaag
atggaggtggaggacctgctgcggaagggtgcctatggcgcgctcatggatgaggaggac
gaggggtcgaagttctgtgaggaagacattgatcagatcctccagcgcaggacacagacc
atcacgatccagtctgaagggaagggctccacatttgcaaaggccagcttcgtagcatca
ggaaacagaactgacatttccttagacgaccccaacttctggcagaagtgggccaagata
gcagagctcgatacagatgccaagaacgaaaaggagagcctggtcatcgacagaccccgg
gtgcggaagcaaaccaaacactacaattccttcgaagaggatgagctgatggagttctct
gagctggacagtgactcggacgagcggcccacacgctcgcggcgattcaacgagaagacg
cggcggtacctgcgggctgagtgcttccgtgtggagaagaacctgctcatatttggctgg
ggacgctggaaagatatcctgacccatgggcggttcaagtggcacctgaatgaaaaggac
atggagatgatttgtcgggccttgctggtgtattgcgtcaaacactacaagggagatgag
aagattaagagttttatctgggatctcatcacgccaacgaaggacggccagaaccaggct
ctgcagaatcactcaggtagcttgtcagcaccggtgcccagaggcaggaaggggaagaag
acaaagaaccagatgctgcttcctgagataaagaatgccgactggctcgccacctgcaac
cccgaggtggtgctccatgatgacagctacaagaagcacctcaaacagcactgcaacaag
gttctgctgcgggtgcgaatgctctactacctgaaggctgaagtgctgggggaggctgcg
gataaagcctttgaggggacccccgccagggagctggatgtgctgctgcctgacattgac
tacgtggagatcccagtggactggtggaatgccgaagccgataaatccctgctcatcggt
gtcttcaagcacggttacgagcggtacaacgccatgcgggcggacccagcactgtgtttc
ctggagaaggtgggcatgcccgatgagaagctgctctctgccgagcagggcgtcagcgac
ggggcacaggatgctgctgaaaggggcagcatggaaaaagaagagagcagtggagaaaag
ctggaggggctgtcaaaacaggaggacatcgtggctgctggggtgggtgaagccagtgag
aagcgggacgagccagcggcagcccaggatggctccgactcagacagatcctgctggcct
gtctcctctgctctcacggccagactgcggcgactcgtcaccgtctaccagcgctgcaac
cgcaaggagctgcctccccgtgccgagatgctggtgcctggtaaccatggctactggctg
caggatgagatgttccggagagcctctgagatggactcggtgaacaaagaaatgcagaaa
aggtggaccaggagggagcaggcagatttctaccgcactgtctcctcctttggggttatc
tatgaccaagagaaaaaggtctttgactgggcccagttccgagccatctctcgactggag
aagaagacagatgagagcctggagaagtacttctacagctttgtagccatgtgcaagaat
gtttgtggtctccctctgtggaaagaggatggtcctccagaccctgacatctacgtggag
cccatcacagaggagcgtgctgccaggaccctgtaccgcatcgagctgctgcggaaggtg
cgcgagcaggtgctcaagtgcccccagctccacgagcgcctcaagctgtgccggcccagc
ctctacctgcccgtgtggtgggagtgtggcaaacacgaccgggacctgctgatcggcacc
gccaagcacggcctgaaccgcactgactactacatcatgaatgacccccagctgtctttt
ttagatgcatacagaaactatgcccagcataaaagaacggggctcccaggcccagaaacc
ctgtgctgcctttaccagtctaactccaaactctacagttcccccctgtacagccagatg
gaccagacctgtgaaaccctggagaatgaagctgagagtcagatcaagctagaaaccgtg
gacagcaccatgtcccaggctgggggcagcccagcggacacaaactgtgaaacattcatg
tccgaagtccgggacatcatttccagtacctacgacgagagctcgctgccagactcattg
gtgtgcatgatgtacgatgagaaggcctgtcccagtgagcagagctccctcgccagggac
agcccaaactgcacagatgttggaagcagcgttgccaaactctccgagggcaagctggag
ggggatgaggatccatccagctgcgatgcagatgccatgagagaggctcccttcctagag
ggtttgcaggtgtgctctgaccgaatggacagtcagaatgaggaagctgagccttcacct
tctacccctgggagcaacccttcacagagtgccgcagccaagctcggcaaaggcttggaa
cagaaaggagcacttgccagcccggcagcagggctgcctgagcatggcaccatggaaagg
gtcctaagtgtggggctctacagtcccagtctccataactatgaactaaaggttcctcct
gagcagaggttcatcagtctgctgcaggagaaaggaatggaggcaaagtcagggccaagt
cagagccacagcgaggaagatgaagaggaagaagaggatgatgataactctgagacagca
gcagatacggtggaaggcttgaatggtcccaggaccagggctgattgtggccccgaggct
catgaactggggggtgaggagcagagctctggtctccccacacccgaggacacttgccca
gaagacgtgaatggcgagagggagtccctggggctgggggagccctgcgcagagggcagg
gaggactgtggctcgaatgaggagagcacccgtcagcactcaccaggccaggctcagagc
cagcccttcagcttgcccacacctctgcctcagggggggcctcagggggcagaacccctg
tgtgtcaggggggagcccttgggccaagccgctgaggggcagacaggctgcacagaggcc
ccacaccctgagcctcagggcataaagcaagaaaagtgtgacaacagagatgacggggag
aaagccagcagcaaccagagcaaagatggtccagagaagtacttggaggaagagaacaag
aattctgcttctgtcctgcctggggagattgatgatcttcaggatgcccgggcaccaacc
attgcccagctgctgcaggagaagacactttactccttctctgagtggcctaaggaccgt
gtgatcatcaaccgcattgacaacatctgccatgccatcctgaagggcaagtggccttcc
tccagccagcagtttgaggcacagagcctgctgacagctccagccatggccagcagcgct
ggcagcaggagcagctttgccgagtcagaagccaccgatcccagcttcaataacggggtg
ttaatgtcacgggtacaaaaggaaggtttcctgagccctgcctttgcaaaagacgagcgg
aagcacaggagaccctatgaattcgagatggagagagatgccaaacagaggagtctggag
cagctggcagcagcccatgtccatccacccattgtgctgaacggctggcgcgaggcagcg
gtggatttgtccagagcctctgatgggtccccggggaactcctctcctttccccctgaac
acaaacatgcccaaattggggaccgtgaatgccctccagagctccctgggcatggacttg
tctggcatcctacaggcggggttaatccatcctgtcactggacagattgtaaacggcagc
ctccgaagagacgatgctgccatgagaaggagacggggcaggaggaaaaatgtcgaaggg
atggacctcatcttcttgaaggagaggcctcttccaaacaggctgcaggatgttcaggaa
gaccagccacagccccctcagaacagtcctctccctgacgggccggttgctgctacctca
gctccacagccagtcccagctgcaggcagccaagagaaggctgtcccaaataagagtctc
ctcgactggctccggcagcagtctgactacacactcgacgttcccagctttggcacagtt
gcagttccggagggctctgatcccagagaaacatggtgcagcatctctgtgctgggaaca
gctgaaagaggaaggaaacacagcacagctgagctgaatttttcagacaagcccaagcag
aggaggcagcgctgcaaggaccccaacaaactggacattagctctctgactggagaggag
cgggtgccggtggtacataagggtaccggacggcggttagggggagccacggcaccagca
ttgaaggaattgccaaggtggcttgatgcaaacttggagtatgctgttgcagctgactgg
gctgacattgttaagctttcaggctacttacccgaaaacaaattcaatcgcatcctcacc
gagcccgtgctccgggacgctgggccgcgccggagagggaggaggccccggagcgaactc
cttaaaggccctggtgttgtagcagattcttcttctggaatgggaccattgttcatgaac
ggactaattgctgggatggatctagtgggacttcagaacatgagaaatatgcaagggatc
cctctgaccgggctggtcgggtttcctgctggctttgcagcagtgcccgctggtgaggat
gtgaagagcaccctgagcatgttgcccatgatgctgccgggcatggcaaccgttccccag
atgttcggtgttggaggactcctcaactcccccatgacgacgacttgtactgcaactgct
ccgacttcgttaacaagcacaacgaaaggtggcacagccagcgccgagaaagcaaatgag
gagaaacagggcagccaggatgggaaaaaagaacctctcgctgaagacaagcctggtcct
agttcattttctaatcagacagaatccgcaataactaccagtagtcctgtagcttttaac
ccatttcttatcccagggatgtctcctggactgatctatccctccatgttcctttcccct
ggcatcggcatggcgctgcctggcatccagcaaaccaggcactcggaggcggcaaacctg
gagagccagaagcggaagaggaagaaagcaaaaggggaattggcaaatccagagccagaa
actgtctcactgccggaaaaagaagctgcaaacagtcaaaactgtgtggagcagagcccg
ccagcggcagcagagaaggagcaggacggaccagcagaggaggagcaccaagcagctcat
gataccgattag
DBGET
integrated database retrieval system
