Corallococcus coralloides: COCOR_00244
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Entry
COCOR_00244 CDS
T01780
Name
(GenBank) putative DNA-binding regulatory protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccx03021
]
COCOR_00244
Transcription machinery [BR:
ccx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
COCOR_00244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
HTH_28
Sigma70_r4
HTH_Tnp_4
HTH_23
HTH_29
DUF1804
Motif
Other DBs
NCBI-ProteinID:
AFE03365
UniProt:
H8MWN4
LinkDB
All DBs
Position
complement(283228..284088)
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AA seq
286 aa
AA seq
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MTARGRTEPAGALSVLQERLAQALEAARRSWPSIALEGPRFAAHLARLVPADGHEDAWGR
LHMADVYLARAAADGVPSALATFEERLMPEVDAAVARLKLPPAGLDEVRQALRQRMLVGS
AEAPARLAAYPGTGPLAGWVRAAALWLALDWQRQRSGQAHSEDGDLSMLVAPGDDPELAY
LKQTYRAEFSASFQAALAALSARQRNFLRLKYLDGLGIDQLGALYGVHRSTAARWVVGAQ
EELLDGTRQRLTERLRLTRSQLDSVLRLISSQLDVSLSRLLRTPSE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccggggaaggacggagccggcaggcgccctctccgtcctccaggagcggctg
gcccaggccctggaagcggcccggcggtcctggccgagcatcgcgttggaaggaccgcgc
ttcgcggcgcacctggcccggctggtccccgcggacggccacgaggacgcctggggcagg
ctgcacatggcggacgtgtacctggcccgggcggcggcggacggcgtgccctcggcgctg
gccacgttcgaggagcgcctgatgccggaggtggacgcggcggtggcgcggctgaagctg
cccccggccgggctggatgaggtccggcaggcgctgcggcagcggatgctggtgggcagc
gcggaggctccggcgcggctggcggcgtacccgggcacggggccgctggcgggctgggtg
cgcgcggcggcgctgtggctggcgctggactggcagcggcagcgctcggggcaggcgcat
tcggaggacggcgacctgtccatgctggtggcgccgggggacgacccggagctggcgtac
ctcaagcagacgtaccgcgcggagttcagcgcgtcgttccaggcggcgctggcggccctg
tccgcgcggcagcgcaacttcctgcggctgaagtacctggacgggctgggcatcgaccag
ctgggcgcgttgtacggcgtgcaccgctccacggcggcgcggtgggtggtgggcgcgcag
gaggagctgctggacgggacgcggcagcggctgacggagcggctgcggctgacgcgctcc
cagctggacagcgtgctgcggctcatctccagccagctggacgtgagcctgagccggctg
ttgcgcacgccctccgagtaa
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