Corallococcus coralloides: COCOR_00956
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Entry
COCOR_00956 CDS
T01780
Symbol
ligD
Name
(GenBank) ATP dependent DNA ligase
Organism
ccx
Corallococcus coralloides
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
RNA_ligase
mRNA_cap_enzyme
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
AFE09218
UniProt:
H8MLH4
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Position
complement(1149678..1152236)
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AA seq
852 aa
AA seq
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MKTSDTQRRLRRYRTKRDFHLTPEPSPDAKAPKSSAPVFVIHKHDATRLHYDLRLEIGGV
LVSWAIPKGPSHDPSVKRLAVQTEDHPRSYADFEGHIPDDQYGGGDSLLWESGTFEVVPP
GDAEAQLKRGHLEVVLHGAKLKGRWHLIRTRPRGGKAQWLFFKAKDDYAKAGYDVTVERP
ESVKSGQVETQGPRKPGVLRNKKPAAPVRKAAKKPARLPSTPEKLLERVWPPMLARLAVS
DEVHDETHAYEVKYDGFRAVCALTHGKIAFQSRRGNDLSGRFARLTAALRELPAKDVVVD
GEIVALDAKGRSRFQILQNTEEGAEQRFMVFDLLWLDGEDLRELPYEERRARLEKLMAGA
QLPLQLSEKVDLPLSRGLLEARRKGWEGLIAKRKDSPYTGTRSGDWLKLKVVAGQEVVIL
GYLPIKNAKAKSEIGALRVGVRGKEGFHDVGKVGTGYTSKDRRELRWLLDATRVKKPAAV
DAPTNTDTVWVKPKYVAQVNFTEWTKDGRLRHPVFQGLRSDKVPQEVVREHPAPIEGAAR
RGSRRAPVQAAARTAKAPAVKTPRGKSRHAPEVVLTHGDRVLFPQAGLTKADVFAYYEQA
APLLLPVLADRPLAHQQWPGGIQAPGFFRHELSGIPAWMPTLRVRHEDKTLRHVNVKDTS
ALLWLANQSALTLHMWLSHAPRLAQPDFVVFDLDPGEGGWKDVVKVATLLHARLDELGLK
SFPKTSGKRGLHVLVPLAPGHTYARTQAFADARARELEEELGDIATTERSIRERGGRLYI
DAGQNARGKTVVAPYSLRAVEGAPFSAPLEWSEVNSRLDPHRFRLKTLKKRLDAVGDLFA
PVLRVKQVLPDE
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
gtgaagacctccgacacccagaggcggctgcgccgctaccggacgaagcgcgacttccac
ctcacgcccgaaccgtcgccggacgcgaaggccccgaagtcgagcgcgcccgtcttcgtc
atccacaagcatgacgccacgcggctgcactacgacctgcgcctggagattggcggcgtg
ctggtgagctgggccattcccaagggccccagccacgacccttccgtgaagcggctcgcg
gtccagacggaggaccacccgcgctcctacgcggacttcgagggccacatcccggatgac
cagtacggcggcggggattcgctgctctgggagtccggaaccttcgaggtcgtgcctccc
ggcgacgccgaggcgcagctgaagcgcgggcacctggaggtcgtgctgcacggcgcgaag
ctcaaggggcgctggcacctcatccgcacgcgtccgcgcggtggcaaggcgcagtggctc
ttcttcaaggcgaaggacgactacgccaaggccggctacgacgtcaccgtggagcgcccc
gagtccgtgaagagcggacaggtggagacgcaagggcctcgcaagcccggcgtgctgcgc
aacaagaagcccgcggcgcccgtgcgcaaggccgcgaagaagccggcccgtctcccctcg
acgccggagaagctgctggagcgcgtgtggccgcccatgctggcgcggctggccgtgtcc
gacgaggtgcacgacgaaacgcacgcctacgaggtgaagtacgacggcttccgcgccgtg
tgcgcgctcacgcacggaaaaatcgccttccagagccgccggggcaacgacctgtcgggc
cgcttcgcccggctcaccgccgcgctgcgggagctgcccgcgaaggacgtcgtcgtggac
ggagagattgtcgcgctcgacgcgaagggccgctcgcgcttccagattctccagaacacg
gaagagggcgcggagcagcgcttcatggtgttcgatctgctgtggctggacggcgaggac
ctgcgcgagcttccctacgaggagcgccgcgcgcggctggagaagctgatggccggggcg
cagctgcccctgcagctctccgagaaggtggacctgccgctgtcgcggggcctgctggag
gcccggcgcaaggggtgggaggggctcatcgccaagcgcaaggactcgccgtacacgggc
acgcgctccggggactggctgaagctgaaggtggtcgcgggccaggaggtcgtcatcctg
ggctacctgcccatcaagaacgcgaaggcgaagtcggagattggcgcgctgcgcgtgggc
gtgcgcggcaaggaaggcttccacgacgtgggcaaggtgggcacgggctacacgtcaaag
gaccgccgcgagctgcgctggctgctggacgccacgcgcgtgaagaagcccgccgccgtg
gacgcgcccacgaacacggacaccgtctgggtgaagccgaagtacgtggcccaggtgaac
ttcaccgaatggaccaaggacggccgcctgcgccaccccgtgttccagggcctgcgcagc
gacaaggtgccgcaggaggtcgtgcgcgaacaccccgcccccatcgaaggcgccgcacgc
cggggctcgcggcgcgcgccggtgcaggccgccgcccgcaccgcgaaggcgcccgccgtg
aagacgccgcgcgggaagtcccggcacgcgccggaggtggtcctcacgcacggcgaccgc
gtgctgttcccccaagccggcctgacgaaggcggacgtgttcgcgtactacgagcaggca
gcgccgctgctattgcccgtgctcgcggaccggcccctggcccatcagcagtggcccggg
ggcatccaggccccgggcttcttccggcacgagctgtccggcatccccgcgtggatgccc
acgttgcgcgtgcgccacgaggacaagacgctgcgccacgtgaacgtgaaggacacgtcc
gcgctcctgtggctcgccaaccagtccgcgctcacgctgcacatgtggctgtcccacgcg
ccccggctggcgcagccggacttcgtggtgttcgacctggaccctggcgagggcggctgg
aaggacgtggtgaaggtggccaccctgctgcacgcgcgcctggacgagctggggctcaag
tccttcccgaagacctccggcaagcgcggcctgcacgtgctggtgcccctggcgccgggc
cacacctacgcgcgcacccaggcgttcgcggacgcgcgggcgcgtgagctggaggaggag
ctgggcgacatcgccaccacggagcgctccatccgcgagcgcggcgggcggctctacatc
gacgcgggccagaacgcgcgcggcaagacggtggtggcgccctactccctgcgcgccgtg
gagggcgcgcccttctccgcgccgctcgaatggagcgaggtgaacagccgcctggacccg
caccgcttccgcctgaagacgctgaagaagcgcctggatgccgtgggggacctgttcgcg
cccgtgctccgggtgaagcaggtgctgccagacgagtga
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