Corallococcus coralloides: COCOR_01330
Help
Entry
COCOR_01330 CDS
T01780
Symbol
priA
Name
(GenBank) primosomal protein N
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COCOR_01330 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccx03400
]
COCOR_01330 (priA)
Enzymes [BR:
ccx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COCOR_01330 (priA)
DNA repair and recombination proteins [BR:
ccx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
COCOR_01330 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
AAA_30
zinc-ribbons_6
AAA_16
DUF2321
Motif
Other DBs
NCBI-ProteinID:
AFE09982
UniProt:
H8MTK4
LinkDB
All DBs
Position
1606037..1608430
Genome browser
AA seq
797 aa
AA seq
DB search
MEQEHFALGGFPRAQGEAPSRGSIPLRTRRTEVGREVSQRDPAATVRPVVSATPAQLASV
AVGRPVRGEFTYLVPEALAGNLAPGQRVLVPFGRGMALGFYLGPANAPVEGGVRLKPIQR
VLEDSPSLPKDLIALLRFTAEHYRYPLGEVIRGALPPGLSTAVDEKEARPDIQFFVEALV
TEVPPALARAPAQAAVLQYLLAVGGRAPLDEVTHAIPGARETLKKLATRKFVKWVEVTLQ
PGVREGLVQNRPDRLTPEQALAVKELQGAVDVGGFQPYLLHGVTGSGKTEVYLRAVEHTL
ARGLGSLVLVPEIALTPQLVGRFRSRFGGDVAVLHSGLKDRERLFHWQALRKGTVKIAVG
VRSAVFAPVEHLGLIVVDEEHDPSFKQDEKLRYQARDLAVVRGKQASAVVVLGSATPSLE
TLQNTRSGRYKLIELKNRVDDRPMPTINLVDLRVERPREGQVTEEAPILSPQMLQAMEET
VTKGQQVILFLNRRGHSTILLCEVCGLSLKCHDCDVCMTHHRSQNRVVCHYCGVAFPVPN
ACRECTGPLLKLGIGTERVEAEVLERMPHARVARLDRDSATSAEKLTELLASFARREIDV
LVGTQMVAKGHDFPGVTLVCVVMADTSLAIPDFRAAERTFHLLTQVAGRAGRGKDPGRVL
VQTYNPDAEPVRRMLAHDFDGFSKQELEWRKALAYPPFARMAAVRLEGEHPEQTAGVARF
LGNLVGRHMPPASAGVRLLGPALAPIARIRGKTRWQLLLKAPTHAALAPLLARLEAALAD
VPNGVKVVIDVDPGAML
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagagcacttcgcgctgggtggttttcctcgggcacagggagaggccccctct
cgcggttccattccattgcggacgcggcgtacggaagtgggaagggaagtgtcgcagcgg
gatcccgccgctacagtgcgccccgtcgtgagcgccactcccgcccaacttgcctctgtc
gccgtgggccgtcccgtgcgcggggagttcacctacctggtgccggaggcgctcgcgggc
aatctcgccccgggccagcgcgtgctcgtgcccttcggccggggcatggcgctgggcttc
tacctggggcccgcgaacgcgccggtggaaggcggcgtgcggctcaagcccatccagcgc
gtgctggaggactcgccgtccctgcccaaggacctcatcgcgctcctgcgcttcaccgcg
gagcactaccgctacccgctgggcgaggtgatccgcggcgcgctgccgccgggcctctcc
accgcggtggatgagaaggaggccaggccggacatccagttcttcgtggaggcgctcgtc
acggaggtgcctccggcgttggcccgcgccccggcgcaggccgcggtgctccagtacctc
ctggcggtgggcggacgcgcgcccttggatgaggtgacgcacgccatccccggcgcgcgc
gagacgctgaagaagctggccacgcgcaagttcgtgaagtgggtggaggtgacgctccag
cccggcgtgcgcgagggcctggtgcagaaccgcccggaccgcctcaccccggagcaggcc
ctggcggtgaaggagctccagggcgccgtcgacgtgggcggcttccagccgtacctcctg
cacggcgtcaccggcagcggcaagacggaggtctacctgcgcgcggtggagcacacgctc
gcgcgcggcctgggcagcctggtgttggtgccggaaatcgcgctgacgccgcagctggtg
gggcgcttccgcagccgcttcggtggcgacgtggcggtgctgcactcggggctgaaggac
cgcgagcggctgttccactggcaggccttgcgcaagggcacggtgaagatcgcggtcggc
gtgcgctcggcggtgttcgcgccggtggagcacctggggctcatcgtcgtggacgaggag
cacgacccgtccttcaagcaggacgagaagctgcgctaccaggcgcgcgacctggccgtg
gtgcgaggcaagcaggccagcgcggtggttgtgctgggctccgcgacgccttcactggag
acgctccagaacacgcgctccggccgctacaagctgattgagctgaagaaccgcgtggac
gaccggcccatgcccaccatcaacctggtggacctgcgcgtggagcgtccgcgcgaaggc
caggtaacggaagaggcgcccatcctgagcccgcagatgctccaggccatggaggagacg
gtgaccaaggggcagcaggtcatcctgttcctcaaccgccgaggccacagcaccatcctc
ctgtgcgaggtgtgcggcctgtcgctcaagtgccacgactgcgacgtgtgcatgacgcac
caccgctcgcagaaccgggtggtgtgtcactactgcggcgtggcgttcccggtaccgaac
gcctgccgcgagtgcaccggcccgctgctcaagctcggcatcggtacggagcgcgtggag
gcggaggtcctggagcggatgccacacgcacgcgtagcgcgactggaccgggactccgcg
acgagcgcggagaagctgacggagctgctggcgtccttcgcgcggcgggaaatcgacgtg
ctggtgggcacccagatggtggccaaggggcacgacttcccgggcgtgacgctggtgtgc
gtggtgatggcggacacgtccctggcgattcccgatttccgagccgctgagcggaccttc
cacctgttgacccaggtggcggggcgcgcggggcgcgggaaggacccggggcgggtgctg
gtgcagacctacaacccggacgcggagccggtgaggcggatgctggcgcacgacttcgac
gggttctccaagcaggagctggagtggcgcaaggcgctggcctatccgcccttcgcgcgc
atggcggccgtccggctggagggcgagcacccggaacagaccgcgggtgtggcgcgcttc
ctggggaacctggtgggacgacacatgccgccagcgtcggcgggggtgcgcctgttgggg
ccggccctggcgccgattgcccgaatccggggcaagacgcgctggcagttgctcctgaag
gcgccgacacatgcggcgctcgccccactgctcgcccggttggaggcggcgttggcggat
gtgcccaacggggtgaaggtcgtcatcgacgtggatcccggggccatgctgtag
DBGET
integrated database retrieval system
