Capnocytophaga cynodegmi: CGC48_07580
Help
Entry
CGC48_07580 CDS
T05499
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ccyn
Capnocytophaga cynodegmi
Pathway
ccyn00521
Streptomycin biosynthesis
ccyn00523
Polyketide sugar unit biosynthesis
ccyn00541
O-Antigen nucleotide sugar biosynthesis
ccyn01100
Metabolic pathways
ccyn01110
Biosynthesis of secondary metabolites
ccyn01250
Biosynthesis of nucleotide sugars
Module
ccyn_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccyn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CGC48_07580 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CGC48_07580 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CGC48_07580 (rfbC)
Enzymes [BR:
ccyn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CGC48_07580 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ATA68501
UniProt:
A0A250E6M8
LinkDB
All DBs
Position
complement(1680892..1681461)
Genome browser
AA seq
189 aa
AA seq
DB search
MNIIQTEIKDVIIIEPKIFGDERGYFFESFSQEKFVEQVCKTTFVQDNESKSRYGVVRGL
HFQKPPFSQSKLVRVVVGKVLDVAVDIRKGSPTFGKHVAVELSAENKRQLFVPRGFAHGF
AVLSEEVIFQYKCDNYYNPKEEGSILWNDPTLQIDWKIPHQNIILSQKDKESPLLKDAFH
FDFDVNLYE
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaacataatccaaacagaaataaaagacgttatcatcattgagcctaaaattttcggt
gatgagcgcggatacttttttgagtcgttttcacaagaaaagtttgtggaacaagtttgt
aaaacaactttcgtacaggataacgaatcaaaatcgcgttacggtgtggtaagaggattg
cattttcagaaacctccgttttcgcagtcgaaattggtacgcgtagtagtaggaaaggtt
ttggacgttgcagtcgatattcgcaaaggttcgcctacttttggcaaacacgtagctgtt
gagctttctgccgaaaacaagcgacagttgttcgttcctagaggttttgctcacggattt
gccgtgctgagcgaggaagtcatttttcaatataagtgcgacaattactacaatcccaag
gaggaaggaagcattctgtggaacgaccctacattgcaaatcgattggaaaatccctcat
caaaatattattctttcgcaaaaagacaaagaaagccccttgctgaaagatgcttttcac
ttcgattttgatgtaaacctatacgaataa
DBGET
integrated database retrieval system
