Corynebacterium cystitidis: SAMEA4530656_1390
Help
Entry
SAMEA4530656_1390 CDS
T07131
Symbol
deaD
Name
(GenBank) helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4530656_1390 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccys03019
]
SAMEA4530656_1390 (deaD)
03009 Ribosome biogenesis [BR:
ccys03009
]
SAMEA4530656_1390 (deaD)
Enzymes [BR:
ccys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAMEA4530656_1390 (deaD)
Messenger RNA biogenesis [BR:
ccys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAMEA4530656_1390 (deaD)
Ribosome biogenesis [BR:
ccys03009
]
Prokaryotic type
rRNA helicases
SAMEA4530656_1390 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
Motif
Other DBs
NCBI-ProteinID:
SNV78696
LinkDB
All DBs
Position
1:complement(1454611..1456923)
Genome browser
AA seq
770 aa
AA seq
DB search
MSTSENVTGDVNEPDFVIESETQNNPQDVVEEQETASATEEDTRDAANSEDTGAETADAE
SANEEPTEEPTEHVDQAGNAAEADAGDAVEADAGNAGEADAGNAAEADAGNAGEADAGNA
GEADAGDAGEADAGDAGEADAGNAGEADAGDAAEADAGNAAEAAAEADAGDAAEADHGFD
NLGLPEKVLAAVKKVGFEQPSAIQAETIPLLMEGRDVVGLAQTGTGKTAAFALPVLSQID
PKERYPQALVLAPTRELALQVSDSFQSFADHLGKIQVLPIYGGQAYGVQLAGLRRGAQVI
VGTPGRVIDHLEKGTLDISNLRFLVLDEADEMLNMGFQEDVERILEDTPEEKQVALFSAT
MPNGIRRISKQYLSNPAEVTVKSETRTNTNITQRYLFTAHRNKLDAITRILEVTEFEAMI
VFVRTKHETEELAEKLRARGFSAAAINGDIAQQQRERTVDQLRDGRLDILVATDVAARGL
DVERISHVFNYDIPNDTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNAKIE
EMELPTVDEVNESRKAKFADSITESLESKEMDIFRKLVKDYSEANDIPMEDVAAALATQA
QAGEEFFMKEPPKQKRDRRDRDKWDRDGRRDRGGRGRDRFERDGDFETYRLAVGKRQHVR
PGAIVGALANEGGLSSKDFGRITIAADYTLVELPKNLDGSVLDRLGDTRISGQLIHIEKD
AGGGAGHNRGGGGGRGGRGGYRGRRDRDGRGGRGGFRGRDNRRGRGGWRD
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagcacttccgaaaacgtcaccggcgacgtcaacgagccggattttgttattgagtcg
gaaactcagaataacccgcaggatgtagtggaagagcaggaaactgcttccgccactgaa
gaagacaccagggatgcggcgaactctgaggataccggcgccgaaaccgcagacgcggaa
tcggccaatgaagaaccaaccgaagaacctacagagcacgtcgatcaggctggtaacgct
gctgaagccgatgctggcgacgctgttgaagccgatgctggtaacgctggtgaagccgat
gctggtaacgctgctgaagccgatgctggtaacgctggtgaagccgatgctggtaacgct
ggtgaagccgatgctggcgacgctggtgaagccgatgctggcgacgctggtgaagccgat
gctggtaacgctggtgaagccgatgctggcgacgctgctgaagccgatgctggtaacgct
gccgaagccgctgctgaagccgatgctggcgacgctgctgaagccgatcacggtttcgat
aacctcggtctgcctgagaaggtcctggctgccgtgaagaaggtgggcttcgaacagccc
tccgctattcaggcagagactattccactgctgatggaaggccgcgacgttgtcggcctg
gcgcaaactggtaccggtaaaaccgctgcctttgcgcttcctgttctgagccaaattgat
ccaaaggaacgctacccgcaggcacttgtgctggcgccaacccgcgagctggcgctccag
gtgtcggacagcttccagtccttcgcggaccacctaggcaaaatccaggtgctgcccatc
tacggtgggcaggcttacggcgtacagctggcaggcctgcgtcgtggtgcgcaggtcatc
gtcggtacgccagggcgtgtcatcgaccacctggaaaagggtacgctggatatctccaac
ctgcgcttcttggtgcttgatgaggccgatgaaatgctcaacatgggcttccaggaggat
gtcgagcgcattcttgaagacaccccagaagagaagcaagtagcactgttctcggcaacc
atgccaaatggaattcgccgcatctccaagcagtacctgagtaatccggctgaggtgacc
gtcaaaagtgagacgcgcaccaacaccaacatcacccagcgctacctgttcaccgcgcac
cgcaacaagctcgacgcgatcacccgcatcctcgaggtgaccgagttcgaggccatgatc
gtgtttgtgcgcaccaaacacgaaaccgaggaactggcagaaaaactgcgtgcacgcgga
ttctctgcggctgcgattaacggcgatattgcccagcagcagcgcgagcgcaccgtcgac
cagctgcgcgacggccgcttggacatcctggtagcaacagacgtggctgcccgtggtttg
gatgtggagcgcattagccacgtgttcaactatgacattccgaacgacactgaatcttac
gtgcaccgcattggccgaaccggccgtgcagggcgtaccggtgaggcaattctctttgtc
accccgcgcgagcgccgcatgctgcgttccattgaacgggtgaccaacgcgaagattgaa
gagatggaattgccgacggttgacgaggtcaacgagtcgcgtaaggcgaaattcgctgat
tccatcactgagtccttggaatctaaggaaatggatatcttccgcaagctagtcaaggac
tactctgaggccaatgacatcccgatggaggatgtggcagcagccctggctacccaggcg
caagcaggcgaagagttctttatgaaggaaccaccaaagcagaaacgtgatcgacgcgat
cgcgacaagtgggaccgtgatggtcgccgcgaccgtggtggacgtggacgagaccgcttt
gagcgcgacggtgattttgagacctaccgcttggcagtgggtaagcgccagcacgtgcgt
cccggcgctattgtgggtgcgctagccaacgaagggggcttgagctccaaggacttcggt
cgcattaccatcgcagcggattacacgctggtggagttgccgaagaatctcgatggctcg
gtcctggatcgcctgggagatactcgtatctccggtcagctcatccatattgaaaaggat
gctggtggaggcgcaggccacaaccgtggtggcggcggtggccgtggtggccgtggtggc
taccgaggtcgacgtgatcgcgatggtcgtggtggacgtggcggcttccgaggccgcgat
aaccgccgtggccgtggcggatggcgcgactaa
DBGET
integrated database retrieval system
