Corynebacterium cystitidis: SAMEA4530656_2254
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Entry
SAMEA4530656_2254 CDS
T07131
Symbol
rmlD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys00521
Streptomycin biosynthesis
ccys00523
Polyketide sugar unit biosynthesis
ccys00541
O-Antigen nucleotide sugar biosynthesis
ccys01100
Metabolic pathways
ccys01110
Biosynthesis of secondary metabolites
ccys01250
Biosynthesis of nucleotide sugars
Module
ccys_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SAMEA4530656_2254 (rmlD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SAMEA4530656_2254 (rmlD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SAMEA4530656_2254 (rmlD)
Enzymes [BR:
ccys01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
SAMEA4530656_2254 (rmlD)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SAMEA4530656_2254 (rmlD)
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Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
NAD_binding_4
T2SS-T3SS_pil_N
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
SNV88408
LinkDB
All DBs
Position
1:2317307..2318668
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AA seq
453 aa
AA seq
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MQVSPTAIDGLLIVELDVHGDARGWFKENWQREKMVAAGLPDFSPVQNNISFNTSRGTTR
GLHAEPWDKYVSVASGAVFGAWIDLREGSSSYGAQVTCEISPSVAVFVPRGVANGFQALH
DDTAYVYLVNAHWSPDAQYSFVNLDEVQWPLEPTEVSDKDIAHPALADATPVPPRQVLVT
GAHGQLGRALKVIAPGWEYCSREEFDITAPRAQLQRSRDWSQYSAIINTAAYNDVNGAET
DRATAWAVNAEAPARLASIAAEHNLTFVHVSSDYVFDGTREVHAEDEVPSPLSLYGASKA
AGEASARVVPKHYVIRTSWVFGEGKNFMRTMADLAARGVEPRVIYDQRGRPTSAEDLAKG
IKHLLDVGAEYGVYNVSSAGDVVGRDEIAMAVFIGLGHDPSSVHPVTTEEYAQLVGREAA
RPKNSAFDLSKIEATGFRPSNWRAALALYLATL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtttctcccacggcgattgacgggcttctcattgttgagctagatgtgcacggt
gatgcgcgcggctggtttaaggagaattggcagcgcgagaaaatggttgcggccgggttg
ccggatttttcgccggtgcaaaacaacattagcttcaacacgtcgcgggggaccacgcgc
gggttgcatgcagagccgtgggataagtacgtgtcggtggcgagtggtgcggttttcggg
gcgtggattgatctgcgggagggctcatcgtcgtatggcgcacaggtgacctgcgagatc
agcccgtcggttgcggtgtttgtgccgcgcggggtggccaatggctttcaggcacttcac
gacgacaccgcctacgtgtatcttgtcaacgcgcattggtcgccggatgcgcagtattct
tttgtgaacttggacgaagttcagtggcctctggagcccacggaggtttctgataaggac
atcgcgcatcccgcgcttgccgatgccaccccagtcccaccgcgccaagtgctggtgacc
ggtgcacatgggcagttggggcgggctttgaaggtgattgcaccggggtgggagtattgc
agccgtgaggaattcgacattaccgcgcctcgggcgcagttgcagcggtcgcgggactgg
tcgcagtactcggcgatcattaacactgctgcctataacgatgtcaacggtgctgaaacc
gaccgcgccaccgcgtgggctgttaatgctgaggcaccggcccgtctggcttcgatcgca
gcggagcataacctcacctttgtgcacgtcagcagtgactacgtgtttgatggcacgcgt
gaggtccacgccgaagatgaggtgcccagccccttgagcctgtatggggcgtcgaaggcg
gcgggggaagcgtcggcacgcgtggtgcccaaacactatgtgattcgcacctcgtgggtg
tttggcgagggcaagaattttatgcgcacaatggcggatcttgctgcgcgcggagtcgaa
ccacgggtgatttacgaccagcgcggccgccccaccagcgccgaagatctggccaaaggg
attaagcacctgctggatgtgggggcggagtatggggtgtacaacgtgtcgtcggcaggc
gatgtggtgggccgcgacgagattgccatggccgtgttcatcgggctcgggcatgatccg
tcttcggtgcacccggtaactaccgaggagtatgcgcagctagtgggccgggaggctgcg
cgcccgaaaaattcggcgtttgatttgtcgaagatcgaagcaaccggtttccgtccgagc
aactggcgtgcagcccttgcgttgtaccttgctacgctctga
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