Caldicellulosiruptor danielii: SOJ16_001628
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Entry
SOJ16_001628 CDS
T09647
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
cdan
Caldicellulosiruptor danielii
Pathway
cdan00521
Streptomycin biosynthesis
cdan00541
O-Antigen nucleotide sugar biosynthesis
cdan01100
Metabolic pathways
cdan01110
Biosynthesis of secondary metabolites
cdan01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
cdan00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SOJ16_001628 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SOJ16_001628 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SOJ16_001628 (rfbC)
Enzymes [BR:
cdan01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SOJ16_001628 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WPX07799
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All DBs
Position
complement(1674798..1675355)
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AA seq
185 aa
AA seq
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MYTINKTKLPGCVEIIPNIFDDHRGTSIKLYHSEIFKSLGIKDVLKEVLCVKSHKNVLRG
LHYQKPPFCQAKLVSCLRGSIFDVVVDIRENSPTYGKFECFHIDSKKNNIVYVPVGFAHG
YLVLEDDTIVLYNMSEIYSPEHEGGIRWDSLSIPWPIKNPILSDKDMNLPPFNDSIRISL
NKRKR
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgtatacaataaataaaacaaagttacccggttgtgtagaaattataccaaatatattt
gatgatcatcgtggaacatctatcaagctatatcacagtgagatatttaaaagtttagga
attaaagatgtgttaaaagaggtgctatgtgtaaaatcgcataagaatgttcttcgtggt
ttgcattatcaaaaacctccattttgtcaggcaaaattagtatcttgcttaagaggtagc
atatttgatgttgtagttgatatacgagaaaattcacctacatatggtaagtttgaatgt
tttcatattgattctaagaagaataacattgtttatgtgcctgtaggatttgcacatgga
tatttagttttagaagatgatactatagtgttatataatatgtcagaaatttactcacca
gagcatgaaggtggaattaggtgggattcacttagtattccgtggccaataaaaaacccg
atattatctgacaaagatatgaatttaccaccatttaatgattctataagaatttcatta
aataaaaggaaaaggtga
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