Corynebacterium diphtheriae BH8: CDBH8_0303
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Entry
CDBH8_0303 CDS
T01698
Symbol
rmlD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
cdb
Corynebacterium diphtheriae BH8
Pathway
cdb00521
Streptomycin biosynthesis
cdb00523
Polyketide sugar unit biosynthesis
cdb00541
O-Antigen nucleotide sugar biosynthesis
cdb01100
Metabolic pathways
cdb01110
Biosynthesis of secondary metabolites
cdb01250
Biosynthesis of nucleotide sugars
Module
cdb_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cdb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CDBH8_0303 (rmlD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CDBH8_0303 (rmlD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CDBH8_0303 (rmlD)
Enzymes [BR:
cdb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
CDBH8_0303 (rmlD)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CDBH8_0303 (rmlD)
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Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AEX47828
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Position
complement(297892..299238)
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AA seq
448 aa
AA seq
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MQVRPTAIAGVVIVDLDVHGDNRGWFKENWQREKMVAAGLPDFQPVQNNISFNAERGVTR
GLHAEPWDKFVSVAHGEVFGAWCDLREGSDTFGEVVTCTITPYTAVFVPRGVANGFQALV
DNTSYTYLVNDHWSPDTTYTAVNLDMIDWPLPPTEISEKDRCHPQLAEATPMPPRRILIT
GAHGQLGRALAELLPDAELCSHVDFDVVHPPQRSWRQYEAIINCAAYNNVDAAEDDRARA
WEVNAVAPARLAQIATENNLTLVHVSTDFIFDGTTSVHEETEAPSPLSVYGASKAAGDIA
AAVTPKHYVVRTSWVFGQGGNFVETMRSLAQRGIRPNVISDQRGRPTHAADLAAGIVHLL
RSGADYGVYNLSNSGDVVGRDDLARAVFEHCGVSGAAVTSVTTAEYEALTGPLAQRPAES
TFNLDKIVATGFQPRPWRDAVRDYLGTK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttcgccccactgctattgccggtgttgttattgtcgacctcgacgttcatggc
gataaccgtggatggttcaaggagaactggcagcgggaaaagatggtggcggcgggcttg
ccggatttccagccggtgcaaaacaatatttcttttaacgctgagcggggcgtgacacgt
ggtttgcacgccgagccgtgggataagttcgtgtcggtggctcatggcgaagtgtttggt
gcgtggtgcgacctgcgcgagggttctgacaccttcggcgaggtagttacctgcaccatt
accccttatactgcggtgtttgtgccgcgtggggtggccaatggttttcaggcgctggta
gacaacacaagttacacctacttggtcaacgaccattggtcgccggacactacttatact
gcggtgaatctggacatgattgattggccgcttcctcccacggagatttcggaaaaggat
cgttgccacccccagcttgccgaggccaccccgatgccaccacgtcgcattctcatcacc
ggcgcccatggccagttggggcgtgcgctagccgagttgttgccggatgccgagttgtgt
tcgcatgtggatttcgatgtggttcatcccccgcagcgctcgtggcgccagtatgaggcg
attattaactgcgcggcctataacaatgtggatgcggcagaagatgatcgtgctcgtgca
tgggaggtcaatgctgttgccccagcaaggctggcccagattgctacggagaataatctg
acgttggtgcatgtgtcgacggatttcattttcgacggcaccacgtccgtgcatgaggag
acggaagcgccgtcgccgttgtcggtgtatggggcgtcgaaggcggcgggtgatattgcg
gctgctgtgacaccgaaacactatgtggtgcgtacgtcgtgggtctttggccaaggtggc
aactttgtggaaaccatgcgttcgttggcgcagcgcgggattcgccccaatgtgattagc
gaccagcgtggtcgtccaacccatgcggctgatctggcggcgggtattgtgcatttgctg
cgcagcggcgcagattatggtgtgtacaacctttctaattctggcgatgtggtcggccgc
gatgaccttgcccgcgcagtatttgagcactgtggggtatccggtgcggcggtaacctct
gttaccacagccgagtacgaggccctaacaggcccgttggcccagcgccccgcggagtcg
acgttcaacttggacaaaattgtggccacgggttttcaaccgcgcccatggcgggatgct
gtgcgggattacttgggcaccaagtag
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