Clostridioides difficile CD196: CD196_3302
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Entry
CD196_3302 CDS
T00997
Name
(GenBank) type IV pilus assembly protein
KO
K02653
type IV pilus assembly protein PilC
Organism
cdc
Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cdc02044
]
CD196_3302
02035 Bacterial motility proteins [BR:
cdc02035
]
CD196_3302
Secretion system [BR:
cdc02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CD196_3302
Bacterial motility proteins [BR:
cdc02035
]
Pilus system
Pilus assembly proteins
CD196_3302
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF4492
Motif
Other DBs
NCBI-ProteinID:
CBA66676
UniProt:
A0A0H3N6Y5
LinkDB
All DBs
Position
complement(3902082..3903290)
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AA seq
402 aa
AA seq
DB search
MKSFKYTVIKEDGKKQTDVIEANDFNEARNLLRKRNLRVIEIKESKNKNIRLSSRKRKKD
LGADQISHFCRQFAIIVSSGINSISGLETLARRSTNITLREEINRIVAEIKVGSTIADSM
LSSKSKFPKLLGAMVATGEATGKLDEVLKSMASFYASEHRVKQKLRNAATYPLIVLISSF
IMIFIFTTFMVPKMINSITTVGATLPLITRIVMGFGMFMKKFWIIVLLVIILFIYQFKKY
LKTSVGRAHKDRVINKIPVLGKGINCMVATRFSRALYLFVSTGYPLVQGLDYIIDSVNNT
MAEKILASAKDGITRGEGLAENLERYTYFDSVLVQMIAIGEQTGELENISRQMAEFYEYE
SEIYLNRMASMIEPVLIIAVGIIVAILVVSIFMPMLSIYDAM
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagttttaaatacacagtaataaaagaggacggaaaaaagcaaactgatgtgatt
gaagccaacgattttaatgaagctagaaatcttcttagaaagagaaatcttagagttatt
gaaatcaaagaaagcaaaaataaaaatataagattatctagtagaaagagaaaaaaagac
ttgggagctgaccagataagccacttttgtagacagtttgctattatagtatcttctggt
ataaatagtatttcaggattagaaacattagctagaaggtcaactaacattacattaaga
gaagaaattaatcgtatagtggcagaaataaaagtaggttctactattgcagattcaatg
ctttcatcaaaatcaaagtttccaaagttacttggtgctatggtagctacaggtgaagct
acaggtaaattagatgaagtattaaaaagtatggcttcattttatgcaagtgaacacagg
gttaaacaaaagcttagaaatgctgcaacatatccattaatagttttgatttcttcattt
ataatgatttttatatttacaacatttatggtgcctaagatgattaattcaattacaaca
gtaggagcaactcttccacttataacaagaattgttatggggtttggtatgtttatgaag
aagttttggataatagtacttttagttattatattatttatctatcagtttaaaaaatat
ttaaaaacgtcagttggaagggctcataaagatagagttataaacaagatacctgtttta
ggaaaaggaataaattgtatggtagctacacgattttcaagagcattgtatctatttgta
tcaacaggatacccattagttcaagggcttgattatattatagatagtgtaaataacacc
atggcagagaagattttagcatcagctaaagatggaataacaagaggagaaggcttagca
gaaaatttagagagatatacgtattttgactctgtgttggtacagatgatagctataggg
gagcagacaggggaattagagaatataagtagacagatggcagaattttatgagtatgaa
tccgagatttatttaaataggatggcctcaatgatagagcctgttttaataattgcagtt
ggtattatagttgcgatactggttgtatcaatatttatgccaatgcttagtatatatgat
gccatgtag
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