Cryptococcus deuterogattii: CNBG_0101
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Entry
CNBG_0101 CDS
T09796
Name
(RefSeq) pre-mRNA-processing ATP-dependent RNA helicase PRP5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNBG_0101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdeu03041
]
CNBG_0101
Enzymes [BR:
cdeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNBG_0101
Spliceosome [BR:
cdeu03041
]
Complex A
U2 snRNP components
U2 related factors
CNBG_0101
Complex B
CNBG_0101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
TsaD
Motif
Other DBs
NCBI-GeneID:
88176353
NCBI-ProteinID:
XP_062880269
LinkDB
All DBs
Position
4:complement(1195815..1199312)
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AA seq
1063 aa
AA seq
DB search
MPRSPYRSSNRSYRSPSPVRYDRSHPSSSSRRLDDRKASRFDDGYSRDRERDRERDRDYR
DRDRDYDRRRDRDRYRDDDRDRRRRDDRDDRRREERDRDSDRKKDSERRSPLPAIRVEPN
VSSASPAPETEEEKKRKAKERLETWKRQRALKEGKSATPESKSPAPPPVTSGLPPKPTAF
TLSRIGLPLKPTNPTPLKRSMTTLDDEDTSDRKLQKLDLPDFDPEVQSGDAAQVGSIGAD
LAVADGDEEDDTVVKKEEEKMDVDKKEEEDEEEDPLDAFMRDNVQQVVEVNKADAKRMGL
RIAEDGSDDEDRGQVVEKDKLAEAEALLQQAAAKSRKKDLPPPDHSKIDYEPFRKAFYVP
PVEVLEMDEEEAELMRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCLDVIKHQGWETPTSI
QAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVLSPTRELA
TQIYKECQPFLKVLNIRASCCVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVT
NVRRTTYIVMDEADRMFDMGFEPQVMKIINNVRPNAQKVLFSATFPKTMESLARKILVKP
LEITVGGRSVVAPEIDQRVEVRDGDTKFTRLLEILGEMGEEHKDEDDFRALIFVDRQESA
DDLFRELLQRGYVCASLHGGKEQVDRDEAIKNFKNGDVPIIVATSVAARGLDVKELKLVI
NYDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVDIVRALEASKAFIPDELKQM
SDSFLGKIKSGKARAAGSGYSGKGLERIERRREEKDRAEKTTYGDTSEALSLSSREGAVI
PYKAKTNEFKPPETSHKGDADYTFTEIKVDIINGPAPDRVPSQPVFNPKNAVASLPAQTL
AALEKAKKEGRGVDAANLANVVAKLTQSIELTKAEKLGLAAATSAPRLAPGARTKDPDAT
DWHAIFPINDYPQKARWKATNKEQMTLLQEVSGASITMRGRFYPPGEEPALGGEPKLSLL
IESNDEMRVRAAVEEIRRVLVEGSVQALNAVDRAGASGGRYAV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcctagatcaccatatagatcatcgaataggagctaccgtagtccctcgcctgtccgg
tacgaccgttctcatccgagctcctcttctagacgtctcgacgatcgaaaggcctcaagg
ttcgacgacggctactcgagggaccgagaaagagatagggaaagggatagagactacagg
gatagagacagggattatgataggaggcgagatagggacaggtatcgtgacgatgaccga
gacagacggaggagagatgatagagatgataggcggcgagaagagagagatcgggattct
gaccgcaagaaagattctgagcgaagatctcctctgccagccattcgtgtggaaccgaat
gtatcatcagcctcaccagctccggaaaccgaagaggagaagaagcgaaaggcaaaggag
agactggaaacttggaagcgccagcgtgccttgaaggagggcaagtctgcgacacctgag
tcgaagagccctgcaccaccccccgttacctctggtctgccgcccaaacccaccgccttt
accctttctcgtatcggtctgccgctcaaacctacaaatccaacgccactgaaacgtagc
atgactactcttgacgacgaagatacatctgaccgcaaactacaaaagttagacctacct
gattttgatcctgaagtccaatcaggagatgcagctcaagtgggctccattggcgcagac
ttggcggtggcggatggcgatgaagaagatgatacggtggtcaaaaaggaggaggagaag
atggatgtagacaagaaagaggaagaagatgaggaagaggacccgttggatgcgttcatg
agagacaatgtgcagcaggttgtggaagtgaacaaggcggacgccaagcgaatggggttg
cggattgctgaggatggcagcgacgatgaagatcggggacaagttgtggagaaggataag
cttgccgaggcggaagcattgttacaacaagctgcggctaaatcacgcaagaaggatctt
cctccccctgatcattccaaaatcgactatgaaccttttcgcaaagctttctacgtaccc
cctgttgaagtattggagatggatgaggaagaggctgagttaatgcgtttggaaatggat
ggtatcaaaatccgaggacaagatgctccaaagccagttaggaattggggcgcctttggt
ctgcctcaaggatgtctcgatgtgatcaagcaccaaggttgggaaacacccacttccatt
caagcccaggctatcccagccataatgtctggccgagacgtcattggtattgccaaaacc
ggttccggtaagactgttgctttcctcttgccaatgcttcgtcacgttcgcgaccaaagg
cctgtgtccggtagtgaagggccgattgcggttgtcttgtcacctactagggagttggcc
actcaaatctataaagagtgccagccctttctgaaggtgcttaacattagggcgtcctgc
tgcgtcggcggttcatccattagtgaggatatcgcagctatgaagaagggtgccgaagtc
gttatctgcactcctggacgaatgatcgaccttctcaccgccaataacggccgcgtcaca
aacgtacgacgcaccacttacattgttatggatgaagcggaccgaatgtttgatatgggc
tttgaacctcaagtcatgaaaattatcaataatgttagaccgaacgcccagaaggttcta
ttctcggcaacattccccaagacaatggaatcacttgcgaggaaaatattggtgaagccc
ttggagattacagtcggaggtagaagtgttgttgcacccgaaattgaccagcgtgtcgag
gtgcgtgatggtgatacgaagttcacacgtttgcttgaaatccttggtgaaatgggcgag
gagcacaaggacgaagacgatttccgagcccttatctttgtcgaccgtcaagaaagtgcg
gatgatctatttagagagctgctacagaggggttatgtttgtgcttcactgcacggcggt
aaagagcaggtcgatcgtgatgaagcgatcaaaaacttcaagaacggtgatgtgcccatc
atcgtggcgacttctgtagcggcgagaggtttggatgtaaaagaattgaagcttgtcatt
aactatgacgcacctaaccacatggaagattatgttcaccgtgctggccgaacaggtcgt
gccggtaacaaaggcacttgtataacattcatcacgccggagcaggaaagattctccgtc
gatatcgtacgagctttagaagcgagtaaggcattcatccccgatgagctgaaacagatg
tcggattcattccttggcaagatcaagtctggcaaagcgcgagctgccggtagtggatac
agtggtaaaggccttgagcgaattgaacgccgtcgcgaggagaaagacagagccgaaaag
acaacctacggagatacgtccgaagccctgtcactctcctcgcgtgagggagctgtcatc
ccctacaaagccaagacgaacgagttcaagcctccagagacctctcacaagggtgatgcc
gattatacattcacagaaattaaggttgatatcatcaatggtcctgcacctgaccgcgtt
ccctctcaacctgtatttaacccgaagaatgccgtagcttcgctgccagcacagacattg
gcggcactggagaaggcaaagaaggagggccgaggcgtagatgcggcgaatctggccaat
gtggtggccaaacttactcaatctatcgaactcaccaaagccgagaaacttggcctggcg
gccgccacctctgcacctcgtcttgctcctggcgcgagaacgaaagatcccgacgccacc
gactggcacgctattttccccatcaatgattaccctcaaaaggctcgttggaaggcgacc
aataaggagcagatgaccttgctacaagaagtctcaggagcaagtattacaatgcggggc
agattttacccgcctggggaggagcctgcgttgggtggtgaacccaagctgagtttgttg
atagagagcaacgacgaaatgagagtgagggctgctgtagaggaaattcgaagagtgctg
gtagaaggatcagtacaagcgcttaatgcggtcgatagggcgggtgcgagtggtggaagg
tacgctgtgtag
DBGET
integrated database retrieval system
