Cryptococcus deuterogattii: CNBG_1938
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Entry
CNBG_1938 CDS
T09796
Name
(RefSeq) pre-mRNA-processing factor 40
KO
K12821
pre-mRNA-processing factor 40
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNBG_1938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdeu03041
]
CNBG_1938
Spliceosome [BR:
cdeu03041
]
Complex A
U1 snRNP components
U1 related factors
CNBG_1938
Complex B
CNBG_1938
BRITE hierarchy
Motif
Pfam:
FF
WW
SAM_3
Arm-DNA-bind_4
MS_C
Motif
Other DBs
NCBI-GeneID:
88178321
NCBI-ProteinID:
XP_062882002
LinkDB
All DBs
Position
5:complement(292963..295419)
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AA seq
716 aa
AA seq
DB search
MSGEEKSLWSEYKNAQGRVYWSHAVTKQSVWEKPDELKTPFEKALSKTQWKQYASNNRPY
YVNTVTKETKWDLPPELVELKKQIEEEEARNAERQRRKEQGIASLTPSPRESRSPTPEDI
RELRASAANAIALYKPSTATPASVPETPLKPQNDDLPVITMPPGGFETKEEAEAAFIHLL
KKAGINETHTWDIAMRIIVLDPLYNALDTLAEKKAAFEKYTNGILDERRAAKDARISRLR
PIFHKMFAKSGVIKSYSTLKTADRAFGRDRYWQEAFPEERMLLLDEYTSKLRRDEESAER
ELRDRNIITLTALLPTLDLSVSTRWRAAHDLIISSPAFRSDKGLQKIEVLDMIKVYEDYA
YKLEQEHKEESRKLKIEATRNARKAREGFKALLKELDHNGELTRTSKFKDTYPKIKNDER
YIALLGLSGSSPLELWMDAVDDIGEEVERAAEKINNALSKVDKKITLETSREELEQWCRE
VHMDTQIAEKLRKEVYNLTHSRLRQIADEEARRIERRKRRRIEDLRYALKKVGAIELDMS
YDQALPHMQDLEEFKEIEEEDDRKSAYEKFIKRQKEKLAEAESSKRDYGDRGDSYRDSHR
SGDRRHSRDDAMDVDDDVKSRRGDREREKDRDRDYKSSRRDDRDRDRGDRRDRDRERERD
KERDRSERRDRDRERERKHGGEQGEDREHKRRRLSSASSAAPRKDRNDGEIEEGEI
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggagaagaaaagtctctctggagcgagtacaaaaatgctcaaggtcgggtctac
tggtcgcatgctgtcactaagcaatcggtttgggagaagccggatgaactaaagacgcca
ttcgaaaaagccctttcaaagacccaatggaaacaatatgcctcaaacaataggccttat
tatgtcaacaccgttacgaaggagaccaaatgggacttgccgcctgaacttgttgaactg
aagaaacagattgaagaggaagaggccagaaatgcagagaggcaaaggaggaaggagcaa
ggaattgctagccttactcccagccctagggagtctcgctctcccacacccgaggacatc
cgcgaactgcgcgcttctgcggccaatgccattgctctctacaaacctagcacagcgaca
cctgcgagtgtacccgagactcctctcaaaccgcagaatgacgatcttccggttatcacc
atgcctcccggtgggtttgaaaccaaggaagaggccgaagcagctttcattcaccttctc
aagaaggcgggcatcaatgaaacccatacatgggacattgcaatgaggataattgtcttg
gatcccctctataatgctttggatacgctcgccgaaaagaaggcggcgtttgaaaagtat
accaatgggatccttgatgaacgtcgtgctgccaaggatgcacgtatctctcgtctccga
cccatttttcacaagatgttcgccaagagtggagtaatcaagagttattccacattaaaa
acagcagaccgggcgtttggaagagacaggtattggcaagaggccttccctgaagagagg
atgttgcttttggatgagtacacttcaaaattgaggcgtgatgaagagtctgctgaaagg
gagcttcgtgatcgcaacattattactcttactgctttgcttcctaccctcgacctttcc
gtctccactcgttggcgagccgcacatgatcttatcatctcttctcctgccttccgctcc
gataaaggccttcagaaaattgaagtccttgatatgatcaaggtctatgaggattacgcg
tacaagctcgagcaagaacacaaagaggagtctaggaaactcaagattgaggcaacaaga
aacgctcgaaaggcacgagaggggttcaaggcgttgctcaaggagttggatcataatggg
gagcttactcgaacctccaaattcaaagacacatacccgaaaatcaagaacgatgagcgc
tacattgcgcttcttggtttatctggctctagccctctcgagctttggatggacgcggta
gacgatataggtgaagaggtcgagcgtgctgctgagaagatcaacaatgctttgagtaag
gttgataaaaagatcactctcgagacgagtcgggaagagctggagcaatggtgcagggag
gtgcatatggacactcagatcgccgagaagttgaggaaagaggtttataatctcacgcac
tctcgccttaggcagattgccgacgaagaagctcgtcgaattgaacgtcgaaaacgacga
cgcattgaagatctccgttatgctcttaagaaggtcggtgccattgaattggacatgtcg
tatgatcaggccttgccccatatgcaggatctagaagaattcaaggaaatcgaggaagaa
gatgatcgaaagtccgcctatgagaaatttattaagcgtcagaaggagaagctcgctgaa
gccgaatcttccaagcgagactacggcgaccgaggggactcataccgggactctcaccgt
tctggagaccgtcggcactccagggatgacgctatggatgtggatgatgatgtcaagtcc
cgtcgaggtgaccgtgagagggagaaggacagggatcgagactacaagtcgtcaagacga
gatgatcgggatcgtgaccgcggcgacaggcgggacagagaccgtgagagggaaagggac
aaggaacgagaccgcagcgagagaagggacagggacagagagagggagaggaaacatggc
ggggaacaaggtgaagatcgggaacataaacgacggaggttatcatctgcttcgtcagcg
gcccctaggaaagatagaaatgatggggagattgaggagggcgaaatttaa
DBGET
integrated database retrieval system