Cryptococcus deuterogattii: CNBG_2320
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Entry
CNBG_2320 CDS
T09796
Name
(RefSeq) uncharacterized protein
KO
K14328
regulator of nonsense transcripts 3
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03013
Nucleocytoplasmic transport
cdeu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNBG_2320
03015 mRNA surveillance pathway
CNBG_2320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_2320
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CNBG_2320
mRNA cycle factors
P-body specific factors
CNBG_2320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
88178684
NCBI-ProteinID:
XP_062882365
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All DBs
Position
7:462147..463634
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AA seq
427 aa
AA seq
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MVPQPSTAAPRNKLVIRRLPPTLPEDIFWQSVSTWITDKTCLWKSFVKGKAGDSNYDSHP
VYSRAYVLMADPESLVNFHRAFDGHIYKSKTGAEFQAIVEYAPFQKTPLKTKVKVDNRQG
TIDEDPDYLSFIESLNAPVTKPALEVATPVTQPTTTPLLEHLRSQKSASKSKSKAAKAAQ
NQSQSSTATPESARRAAALASINAASQRRGGQANAGPVMVAGKGREVMITPSSTPPVPDS
GKQKQQGEQAQQGAKHEQTDKEKKSRGGRKRNKGKDKQKEGVNGVPSGRQTPSGPPTSST
TPQAPLGGRPVQPARIDNPVSNMDSQNQSVSAPKTASGSARAAQAPAGKSGAGAGSNGEP
RGSESGRGRQRGGRGRGGGGQPKTTPAGPQVKILSRNPVPPAGPGPRRGDKGGAASDAGA
AFARIDM
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgcagccttcgactgccgcgcctcgcaacaaactcgtcatccgccgtctcccg
ccaactttgcccgaggacattttttggcaatcagtctccacatggattactgacaagact
tgtctctggaaaagttttgtaaagggaaaagcaggagacagtaattacgattcgcatccc
gtctattccagggcatacgtgttgatggcggatcccgagtccttggtaaacttccatcgt
gcctttgatggacacatctacaaatcaaagactggtgccgagttccaggccattgtcgag
tatgccccgttccagaaaactcctctcaagactaaagtaaaagttgataatcgacaaggt
acaattgacgaggatccagactatttgtcatttatagaaagtcttaatgccccagtcaca
aagcctgctctggaagttgctacgccagtcacccagcccactacaacccccctcctcgag
catctccgctctcaaaaatcagcaagcaagagcaaatccaaagcagctaaggccgctcaa
aatcagtcccaatcatccactgctacacctgaatctgctcgacgagcggccgctctcgct
tctatcaatgctgcttcgcagcgacgtggtggtcaggcaaatgccggcccagtcatggtc
gctgggaaaggtagagaagtgatgatcactccttcttcgacaccccctgtgcccgatagc
ggtaagcaaaagcaacaaggtgaacaggctcaacaaggcgccaaacacgagcaaacggac
aaggaaaaaaagtcaagaggcggaagaaagaggaataaaggaaaggataagcaaaaggaa
ggagtgaacggcgtcccgagtgggcgacaaactccttcaggcccacctacttcgtcaaca
acaccccaagcgcctttaggcggtagaccagtacaacccgcacgcatcgataatcctgtt
tccaatatggactcacagaaccaatctgtctctgcccccaaaacagcttcaggctctgcc
agggcggcacaagctccagcaggaaaatctggggctggtgctggcagtaatggcgaaccg
agaggtagtgagtctgggcgtggaagacaacgcggtggtcggggacggggaggtgggggc
cagccgaaaacaactcctgcaggtcctcaagtaaagatcttatcaagaaatccagttcct
cctgccggaccgggtccccggcgtggggataagggaggggctgcttctgatgctggcgcc
gctttcgctcgtatcgacatgtaa
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