KEGG   Cryptococcus deuterogattii: CNBG_2320
Entry
CNBG_2320         CDS       T09796                                 
Name
(RefSeq) uncharacterized protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
cdeu  Cryptococcus deuterogattii
Pathway
cdeu03013  Nucleocytoplasmic transport
cdeu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cdeu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CNBG_2320
   03015 mRNA surveillance pathway
    CNBG_2320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdeu03019]
    CNBG_2320
Messenger RNA biogenesis [BR:cdeu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     CNBG_2320
   mRNA cycle factors
    P-body specific factors
     CNBG_2320
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 88178684
NCBI-ProteinID: XP_062882365
LinkDB
Position
7:462147..463634
AA seq 427 aa
MVPQPSTAAPRNKLVIRRLPPTLPEDIFWQSVSTWITDKTCLWKSFVKGKAGDSNYDSHP
VYSRAYVLMADPESLVNFHRAFDGHIYKSKTGAEFQAIVEYAPFQKTPLKTKVKVDNRQG
TIDEDPDYLSFIESLNAPVTKPALEVATPVTQPTTTPLLEHLRSQKSASKSKSKAAKAAQ
NQSQSSTATPESARRAAALASINAASQRRGGQANAGPVMVAGKGREVMITPSSTPPVPDS
GKQKQQGEQAQQGAKHEQTDKEKKSRGGRKRNKGKDKQKEGVNGVPSGRQTPSGPPTSST
TPQAPLGGRPVQPARIDNPVSNMDSQNQSVSAPKTASGSARAAQAPAGKSGAGAGSNGEP
RGSESGRGRQRGGRGRGGGGQPKTTPAGPQVKILSRNPVPPAGPGPRRGDKGGAASDAGA
AFARIDM
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggtgccgcagccttcgactgccgcgcctcgcaacaaactcgtcatccgccgtctcccg
ccaactttgcccgaggacattttttggcaatcagtctccacatggattactgacaagact
tgtctctggaaaagttttgtaaagggaaaagcaggagacagtaattacgattcgcatccc
gtctattccagggcatacgtgttgatggcggatcccgagtccttggtaaacttccatcgt
gcctttgatggacacatctacaaatcaaagactggtgccgagttccaggccattgtcgag
tatgccccgttccagaaaactcctctcaagactaaagtaaaagttgataatcgacaaggt
acaattgacgaggatccagactatttgtcatttatagaaagtcttaatgccccagtcaca
aagcctgctctggaagttgctacgccagtcacccagcccactacaacccccctcctcgag
catctccgctctcaaaaatcagcaagcaagagcaaatccaaagcagctaaggccgctcaa
aatcagtcccaatcatccactgctacacctgaatctgctcgacgagcggccgctctcgct
tctatcaatgctgcttcgcagcgacgtggtggtcaggcaaatgccggcccagtcatggtc
gctgggaaaggtagagaagtgatgatcactccttcttcgacaccccctgtgcccgatagc
ggtaagcaaaagcaacaaggtgaacaggctcaacaaggcgccaaacacgagcaaacggac
aaggaaaaaaagtcaagaggcggaagaaagaggaataaaggaaaggataagcaaaaggaa
ggagtgaacggcgtcccgagtgggcgacaaactccttcaggcccacctacttcgtcaaca
acaccccaagcgcctttaggcggtagaccagtacaacccgcacgcatcgataatcctgtt
tccaatatggactcacagaaccaatctgtctctgcccccaaaacagcttcaggctctgcc
agggcggcacaagctccagcaggaaaatctggggctggtgctggcagtaatggcgaaccg
agaggtagtgagtctgggcgtggaagacaacgcggtggtcggggacggggaggtgggggc
cagccgaaaacaactcctgcaggtcctcaagtaaagatcttatcaagaaatccagttcct
cctgccggaccgggtccccggcgtggggataagggaggggctgcttctgatgctggcgcc
gctttcgctcgtatcgacatgtaa

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