Cryptococcus deuterogattii: CNBG_2668
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Entry
CNBG_2668 CDS
T09796
Name
(RefSeq) transcription initiation factor TFIIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03022
Basal transcription factors
cdeu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNBG_2668
09124 Replication and repair
03420 Nucleotide excision repair
CNBG_2668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdeu03021
]
CNBG_2668
03400 DNA repair and recombination proteins [BR:
cdeu03400
]
CNBG_2668
Transcription machinery [BR:
cdeu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CNBG_2668
DNA repair and recombination proteins [BR:
cdeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CNBG_2668
BRITE hierarchy
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
DZR
Motif
Other DBs
NCBI-GeneID:
88179007
NCBI-ProteinID:
XP_062882688
LinkDB
All DBs
Position
8:complement(727495..729245)
Genome browser
AA seq
461 aa
AA seq
DB search
MPLDLNYAPGSEDEEEDNIDDEDFPGPSSRRHGREAAGKRKGKNKDAGRQAWEGEYQKSW
DIVQEDESGSLESAVETLLARGRRKRALMSDTPVRRSIIRHLFIIIDLSESMLDKDYRPT
RFEVILGYLRTYVVEWFDQNPLGQIGVIVMRDRLSEVVIPMGGSPEEIVRALSDKRKLEP
SGEPSLQNGLVMAKGGMAHLPSTSSLETLVIFSAISTADPDGPITIHNVLDTLVTGHIRT
SILSLSGEIKICKQIAEKTGGKFGVALDQDHLKDLLWETIPPPATTITPVTANVRSALAA
GGRGPNQTGGRAPAGDLMVMGFPIRLPLGGETMCACHGLLRKGGYLCPRCGSKLCDVPTD
CEVCGLMVVSSPHLARSFWFLFPVANYGPLAIEDVVGSSETCFGCDSEFSDTSAISAGVA
QVEDGVSPTGRYRCAKCKHDFCADCDLYIHDTLHTCPGCSQ
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcgatctcaactatgcaccgggatcagaagatgaggaggaagacaacattgat
gacgaagactttccaggtccatcttcacggagacatggtagggaagctgctggaaagcga
aaaggcaagaacaaggacgccggaaggcaggcttgggaaggggagtaccagaaatcatgg
gatatcgttcaagaggatgagagtggctctctagagtctgctgtagagactcttctcgca
cggggcagacggaaaagagcgttaatgtcagataccccagtgagacggtctattatccgg
cacttgttcattatcatcgacttgtcagaatccatgttagataaggattaccggccgaca
agattcgaggtcatcctaggataccttcgaacatatgttgtcgaatggttcgatcagaac
cctctaggccagatcggtgtcattgttatgcgtgatcgattatcagaggtcgtcataccc
atgggaggaagtccagaggagattgtccgtgccctttcggacaagcgtaaacttgaaccc
tcaggtgaaccgtcactccaaaatggtcttgtcatggccaagggtggtatggcccattta
ccctccacctcttcccttgaaaccctcgtcatcttctccgccatatccaccgccgacccc
gacggaccgatcactatccacaatgtgctcgatactctggtaacaggacatatacgcaca
tcgatcctctctctttcgggggaaatcaagatttgtaaacaaatcgcagaaaagacggga
ggtaaatttggtgtagctctagatcaagaccatttaaaagatttattatgggaaacgatc
cctccgcccgcaacgaccatcaccccggtcacagccaatgtccgctcagcgctcgccgct
ggtggtcgtggtccgaaccaaacaggtgggcgagcgcctgcaggcgatctcatggtcatg
gggttccccattcggttaccactcggtggagaaaccatgtgcgcctgtcatgggttgctg
agaaaaggaggatatctctgtcctagatgcgggagtaagctgtgtgatgtgccgacggat
tgtgaggtatgtggtctgatggtggtcagcagtccccacctcgcccgaagcttttggttc
ttgttccctgtggccaactatggtccattggccatcgaggatgtggtgggatccagtgag
acatgctttggctgtgatagcgagttttccgatacttccgcgatcagtgctggcgtagcc
caagttgaagatggtgtgagccccacaggacggtataggtgcgccaagtgcaagcatgat
ttctgtgccgactgtgatctttacatccacgatacgctacatacctgcccagggtgttcg
cagtag
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integrated database retrieval system
