Clostridioides difficile R20291: CDR20291_2472
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Entry
CDR20291_2472 CDS
T00998
Symbol
priA
Name
(GenBank) putative primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CDR20291_2472 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdl03400
]
CDR20291_2472 (priA)
Enzymes [BR:
cdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDR20291_2472 (priA)
DNA repair and recombination proteins [BR:
cdl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CDR20291_2472 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
ResIII
DEAD
PriA_C
Helicase_C
PriA_CRR
AAA_19
AAA_22
AAA_11
AAA_30
MetW
PIF1
Viral_helicase1
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
CBE05823
UniProt:
A0A9R0BLZ0
LinkDB
All DBs
Position
complement(2896662..2899187)
Genome browser
AA seq
841 aa
AA seq
DB search
MNNILNLSRGFIMKKYAKVIVRSNTIYTDNLFTYQIPVFLSDVIKIGHRILVPFGKGNKP
TEAFVFQFTDSLDEKIKIKEIIDILDENPIFRKEDLELVYWMKNRYLCTYIECINLIYPK
GYKLNNYKVVLLGESLSGLNEIELKEKISTLSDKNREIVEKVIDSKGKIKVDKLKYIPNL
NSSLYTMNKNGIIKLCWEYKNHKNEKKVCYISLSLESDKIDDYIEQNKINVGSKQKEILS
FLKNNENVEINDLLDLLNASKQSINSLSKKKLITLEFKDYYREPKSIYKSVLKSIKLNNE
QQEAVDEIKSNMFVDDKKPYLIHGVTGSGKTEVYMEIIEFALNQGLDSIFLVPEIALTPQ
TIDRLKSRFGDLVGVFHSKLSEGEKHDVYKAVKAGKVRVLIGARSALFAPFNSLGLIIID
ECHESSYKSEKNPKFNAIEVARFMALKNNITLILGSATPSIEEYYRAKSGEYKLINIKSR
ANDKPLPNIEVVDMKDELDKGNRSIFSLKLQKEIRYAIEENNQVILFLNRRGYANFVSCR
KCGYVFQCENCDISLTYHKKSNTGRCHYCGYEKEIPKECPECKSTYVKPFGVGTQKIEEE
LKYIFPDIKTLRMDKDTTSKKGALDEILNKFKDKEADVLIGTQMLSKGLDFENVTLVGIL
SADMILNFPDFKSFETTFQLITQVSGRAGRADKEGKVVLQTYDTEHYAIKHAIEYDYEGF
YEDEIKIRKAFGYSPFNNMLSVVVSGEDERLVIKNIKNMHASLIYLLEKRGINDLGFILG
PNPCSISKINQNYRWQILFKDENIEINLLKGIIKYICITKRDLIFDKNINVSIDINPNSV
L
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatatattaaatttaagtagaggttttataatgaaaaaatatgcaaaggtaata
gttagaagtaatactatatatacagataatttatttacatatcaaattcctgtattttta
tctgatgtaataaaaatcgggcacagaatattagtaccatttggaaaaggtaataaacca
acagaagcctttgtatttcaatttacagatagcttagatgaaaaaataaaaataaaagaa
attattgatatattagatgaaaatccaatatttagaaaagaagatttagagttggtttat
tggatgaaaaatagatatttgtgtacttatatagaatgtataaatttgatatatccaaag
ggatacaaattaaataattataaagtagtcctattaggtgaaagtttaagtggattaaat
gagattgaattgaaggaaaaaatatcaactttaagtgataaaaatagagaaatagtagag
aaagtgattgatagtaaaggtaaaattaaggttgataagttaaaatatataccaaactta
aatagttctttgtacacaatgaataaaaatggaattataaaattatgttgggaatataaa
aatcacaaaaatgaaaagaaagtatgttatatatctttgagtttagaaagtgataagatt
gacgattatatagagcaaaataaaataaatgtgggaagtaaacaaaaagagatattaagt
tttcttaaaaataatgaaaatgtagagataaatgatttattggatttattaaatgcttca
aaacaaagtataaattctctaagtaagaaaaagctaataaccctagaatttaaggattat
tatagagagccaaaaagtatttacaaatccgtactaaaaagtataaaattaaacaatgaa
caacaagaagcagttgatgagataaagtcgaatatgtttgtagatgataaaaaaccatac
ttaattcatggagtaactggaagtggaaaaactgaagtttacatggaaataatagaattt
gctctaaatcaaggcttagacagtatattcttagtacctgagatagcattaactcctcaa
acaatagataggctaaagagtaggtttggagatttagttggagtgttccacagtaaacta
tctgaaggagaaaaacatgatgtttacaaagctgtcaaagcaggtaaagtaagagtgtta
attggagctaggtcagctttatttgcaccttttaattccttaggcttaataataattgat
gaatgtcatgagtcatcatataagtctgagaagaatccaaaatttaatgctatagaagtt
gctagatttatggcattaaaaaataatataactcttattttaggttcagcaacgccctca
attgaagagtattatagggcaaaatctggagaatacaaacttataaatataaaaagtaga
gcaaatgataagcctcttccaaacattgaagtggtagacatgaaagatgaattagataaa
ggaaatagaagtatatttagtttgaaattacaaaaagaaatacgttatgcgattgaagaa
aataatcaagtgatactatttttaaacagaagaggttatgcaaattttgtatcttgtaga
aagtgtggatatgtgtttcaatgtgaaaattgtgatatatctttaacttatcataagaaa
agcaatactggaagatgccactattgtggatatgagaaagaaattccaaaagagtgtcct
gaatgtaaaagtacttatgttaagccatttggagttggaactcaaaaaattgaagaggaa
ttaaaatatatttttccagatataaaaactttgagaatggataaagatacaacttcaaaa
aaaggtgctttagatgagatactaaataaatttaaagataaagaagcagatgtacttatt
ggaacacagatgttaagtaaagggctggattttgagaatgtaactttagtaggtattttg
tctgcagacatgatattaaattttccagactttaaaagttttgaaactacatttcaattg
ataactcaagtctctggaagagcagggagagctgataaagagggaaaagtagtacttcag
acttatgacactgaacactatgctattaagcatgctattgaatatgattatgagggtttt
tatgaagatgagataaaaataagaaaagcatttggatattctccttttaataatatgtta
agtgtagttgttagtggtgaagatgaaagattagtgataaaaaatataaaaaatatgcat
gcatcattgatttatttattagaaaaaaggggtataaatgatttaggatttatattaggt
ccaaatccatgttcaatatcaaaaataaatcaaaattatagatggcaaatactctttaaa
gatgaaaatattgaaattaatctcttaaagggtataataaaatatatatgtataacaaaa
cgagatttgatatttgataagaatatcaatgtatctatagatattaatccaaacagtgta
ttataa
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