Castellaniella defragrans: BN940_11356
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Entry
BN940_11356 CDS
T03058
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
cdn
Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdn03009
]
BN940_11356
Enzymes [BR:
cdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
BN940_11356
Ribosome biogenesis [BR:
cdn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BN940_11356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
Methyltr_RsmF_N
Ubie_methyltran
Methyltransf_25
MTS
GCD14
Motif
Other DBs
NCBI-ProteinID:
CDM24730
UniProt:
W8X9F4
LinkDB
All DBs
Position
complement(2461993..2463408)
Genome browser
AA seq
471 aa
AA seq
DB search
MSRNDTRDASRSRPRGRPAAAGGGRDAQAPRGKDAGRGQTAGQPARPYVMAAARIEQVRQ
VLGEVLQWKYPADAVLSHWFRAHSNAGLRDRGEIAEAVFDVLRHLRRYRQFAEIGAGSGT
RRLAVLGLASVWPRETLDTGLDEHERAWLDHVLSLSAAGLPRAVRHSVPDWLDERLAALP
DAESLLQALNVPAPLDLRINPLKIEREALLAAWAAGPEARWAARPTPYSPWGIRIQGRPP
VNRWGAFERGEIEVQDEGSQLLAALVAPRRGEMVIDYCAGAGGKTLLLGALMRSTGRLYA
FDVSAARLARAKPRFARSGLSNIVPVAIAERNDQRVKRLRGKAHRVLVDAPCSGLGTLRR
NPDLKWRQHPESLAQLRETQAAILRDAAACVMPGGRLVYASCSILPEENEQQVEAFLAAH
PEFSLLDAGAILADRGIEVALDGPFLRLRPDVHGTDGFFAAVMQRAKGTPE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggaatgacacgcgggacgcatcccgttcccggccgcgcggccgccccgccgcc
gccggcggcgggcgcgacgcccaggcaccccggggcaaggacgccggccgcggccagacg
gcgggccagcccgcgcggccctacgtcatggcggcggcgcgcatcgagcaggtgcgccag
gtgctgggcgaagtcctgcaatggaaatatccggccgacgccgtgctgtcgcactggttc
cgcgcccactccaatgccgggctgcgcgaccggggcgagatcgccgaagcggtgttcgac
gtgctgcgccacctgcggcgctaccgccagttcgccgagatcggcgcgggttcgggcacg
cggcgcctggcggtgctgggcctggcctccgtctggccgcgcgaaacgctggacaccggc
ctggacgagcacgagcgcgcctggctggaccacgtgctgtcgctgtccgccgccggcctg
ccccgggcggtgcgccacagcgtgcccgactggctcgacgagcgcctggcggccctgccg
gacgccgagtccctgctgcaggcgctgaacgtgcccgcgcccctggacctgcggatcaat
ccgctgaagatcgagcgcgaggccctgctggccgcctgggccgcgggtcccgaggcccgc
tgggcggcgcggccgacgccgtattccccctggggcatccgcatccaggggcgcccgccc
gtcaaccgctggggcgccttcgagcgcggcgagatcgaggtgcaggacgagggcagccag
ctgctggcggcgctggtggcgccccggcgcggcgagatggtcatcgactactgcgccggc
gcgggaggcaagacgctgctgctgggcgcgctgatgcgctccaccggccggctgtacgcc
ttcgacgtgtcggccgcccgcctggcccgggccaagccgcgcttcgcgcgcagcggcctg
tccaacatcgtgccggtggccatcgcggagcgcaacgaccagcgcgtcaagcggctgcgg
ggcaaggcccaccgcgtgctggtggacgcgccgtgcagcggcctgggcacgctgcgccgc
aatcccgacctgaaatggcgccagcatcccgaatcgctggcccagctgcgcgaaacccag
gcggcgatcctgcgcgacgccgccgcctgcgtgatgccgggcgggcggctggtgtacgcc
agctgcagcatcctgccggaggaaaacgagcagcaggtcgaggccttcctggccgcgcac
ccggaattctccctgctggacgccggcgccatcctggccgaccggggcatcgaggtggcg
ctggacggccccttcctgcggctgcgccccgacgtccacggcaccgacggcttcttcgcc
gcggtgatgcagcgcgccaagggaacccctgaataa
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