Corynebacterium diphtheriae HC03: CDHC03_1884
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Entry
CDHC03_1884 CDS
T01695
Symbol
spaC
Name
(GenBank) putative surface-anchored fimbrial subunit
Organism
cdr
Corynebacterium diphtheriae HC03
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5979
SpaA
Gram_pos_anchor
VWA
Motif
Other DBs
NCBI-ProteinID:
AEX79611
LinkDB
All DBs
Position
complement(2014286..2019898)
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AA seq
1870 aa
AA seq
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MSSLRIIKKRASIPATLVAVIAMVMSVLLVPLIAAPSANAEPLPKKEFETCGGSVALSFD
LSNSLKPSDVEKSKQAALELVKSLKGSPYRFGIYTFASHSPAAGNKNFAPVSLANDDGYN
KVVAAINDIQMPAIRENNQGSPNGGTNWEGGLQAIANDIDSGIKYDAVYFITDGQPTWDN
NGRNWLGNTTEVVELENAVTQANRISDKGAKLIPVGIGQLSDDKPFDLYKPILPSEDDYY
WSRYPWKIDRSLTGKQMLEKITSPSLAPIILPDYSTLPERMGQQIFTGCFQIAKNIIDAD
GNVIENPAGWNFDIKAAGVQGIPMSIVTDKNGQDTFAMKSISKESFEITITERPTGDQKQ
NFRFKDARCQRYSYGQAPTDIPIKTSDTSITLTADTKSLISCFFNNLPVVPVSVSKKVNV
KTPQLLEELNKQTFDFTYSCEKGANEKEIKGEIKGVHDGESKEIGKVAVGTQCEIKEVTP
TIDDSRMKLSTTWSSENTAAESNQDNGTYRFKAGIDAFKNQKTVLATAENNYEAQTATIK
LTKKIINSDIIPAAKLPEKFPVTYTCRYVPRLNAGPERGELPETNNPYFVGSETVVVPRD
GSIEIGPFPVGTQCSFEETARLDPNVQADAKIPGFSLKTEWNSNICFGNTTDSNSQDCST
NSVWIPKPGQYSINLKNTYTRELASVAIEKKVIGDASDLTNSHEFLFNLRCEDSGVEVYS
RDNIVVKKDGQQVIEDIPVGADCTLSEKQPEQKGVDFVVPALSPFRASTAGDIVKVVVDN
TAKRQLAPISVKKIVNKKDTFSPEISASIDALNYKVVAKCTVPGEETPREVIQTVSNNQT
VDFGSFPVGTTCSFSELTEAPAGTAMSYEFSNGPEVKIEDSTPINKVLTNTFENARGELK
VTKKVLYGDMPQALVDQIPSSFTVSVTCSITGGHSVTLQNDEEKTVPGVVAGDSCTLSEE
VTPITGATHHKHWINGELHKVADSTNITIDPNGSNAIRLENHYETDDVPLELTKHVRVID
HTGNDINPELKNAIVRPDQLFLFQYRCEINGQVVAENTLSAGEINVGSTKVPRGSTCTVE
EDTSSVELPNASLSRVEFSVDGTKTNDKASIAINSDQNRLDATNTFTLKTGSFNLKKKVD
GEGVSTIHEDRRFELAYRCTLGDWKKEGSVTLGRFDSAESHSVKDIPVGASCEIIEDSEK
AQEPNAQVTARWTHTDSTNGWGDTEAACENHAACQVDPNNKFATTVMITENEKENFQGTF
VVWNTYTYDKTKVEINKVLTNDGPELAGKDNFAFTLKCTDPRFAGSDLADKHSIPDPTIT
VALNAKGQSRASYQVADERHDSVEVPVGYNCTVTENPIALYDAKATTQFSGPAVVENTAV
QRTSSNSASARFVTEKQENNGTQKIQVTNDYIRPRADVMVHKTIAKPEHSVDPWLLNTTY
SITYKCDDPYIKDRSYSNDVDIQADAEKPTPIFADPTAHVKIPASAVCTFSENTEGHLPG
EVKGVVDETNKVAEFAGEHEKRSYFTPEIKDVVLSESEPTRIEFTNSYVMPQRILSLQKY
VEGDPGHAVIAPEETFEFSYTCTMPHLFPNQPNPMSQEVGNKVARGVIKIREGETWRSPE
VPIGTSCTIKEEDDPALRTKLENNALRMVPTYLFPTERAGAASAPVIPPLTDRPIYNGTE
PRLQMPESGIELNDAHSHTVVINNVYTTDAEINIAKVNADNSPLPGAHFAIYGIGENGQR
NELAEVADVPAQSVEQALFAVRLRPGSYELVETQAPQGAQLLPKPWRFDVKAANAGAMGD
LEVTLDNYDADSGLITVERPQGKPWLIKVANVSASTLPLTGSNGYLRWLLAGAAGLLVAA
ALWLVARRKR
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagcctacgcatcatcaagaaacgagcgtctatccccgcaacactcgttgctgtc
atcgcaatggtcatgagcgttctactcgtgccgttaattgcagcgccatcagcgaatgcg
gagccactacccaaaaaagagtttgaaacctgtggcggttctgttgcactttcctttgat
ttgtccaattcactgaagccttcggacgttgaaaaatctaagcaagcagcgttggagctg
gtcaagagcttgaaaggatctccctatcgttttggtatttatacctttgcttcacactcg
cctgctgctggaaacaaaaatttcgcgccagtaagtcttgctaatgatgacggatacaac
aaagttgttgccgctatcaatgacatccagatgccagcgatccgagaaaacaatcagggt
tctcccaacggtggtaccaactgggagggcgggctccaagcaatcgcgaatgacatagac
agcggcatcaagtatgacgccgtttacttcatcactgatggtcaaccaacttgggataac
aacggacggaattggctaggaaacacaaccgaagttgtggaattagaaaatgccgttacc
caagccaatcgtatttctgataaaggtgcaaaacttattccggtgggtattggccagctt
tctgatgataagccgtttgatctctataaaccgattcttccttccgaagacgattactat
tggtcgcgttatccatggaaaatagatcgttccctgaccggcaaacaaatgctggagaag
ataacctcaccaagtctagcgccaattattttgcccgactattccacattgccggagcga
atgggacaacagatttttaccggatgtttccaaatcgctaaaaatattattgatgcagac
ggaaacgtgatagaaaatccagctggctggaatttcgatattaaagcggctggtgtgcaa
ggcattcctatgtctatcgtgacagataaaaatggtcaagatacctttgctatgaagtcg
attagtaaggaatccttcgagatcactatcactgagcgacctaccggagatcaaaaacaa
aacttccggtttaaagacgcacgatgccagcgctactcctatgggcaagcacctactgat
attccgatcaaaactagcgatacttcaattactttgactgcagacaccaagagcttgatc
tcttgcttttttaacaacctaccagttgtaccggtttctgtttcgaaaaaagtaaacgta
aaaacgccacaacttttagaagagctcaacaaacaaacctttgatttcacctatagctgt
gaaaaaggagctaatgaaaaagaaatcaagggagaaattaagggcgtccacgacggagaa
tccaaagaaatcggaaaagttgctgttggaactcagtgcgaaatcaaggaagtaactccc
acaatcgacgattctcggatgaagctttccaccacttggagcagcgaaaataccgctgca
gagtctaatcaggataacggtacatatcgctttaaagctggcatcgatgcgtttaaaaac
cagaaaacagttctagctacagcagaaaataactatgaggctcaaacagccactattaag
ctgaccaagaaaatcattaacagtgacataattccagcagcaaaactgcccgagaagttt
cctgtcacttacacctgtcgttacgtaccacgtcttaatgctggtcccgaacgtggtgag
ctcccagaaaccaacaatccgtattttgtaggttctgaaaccgttgtcgttcctcgtgat
ggaagtatagaaatcggaccttttccagtgggaacgcagtgtagctttgaagaaactgca
cgactcgatccgaatgttcaagcagacgctaaaattcctggttttagtttgaaaactgag
tggaattccaacatctgtttcggcaacaccactgatagtaattctcaagattgttctact
aactcggtatggattcccaaaccaggccaatattcgatcaacttaaaaaacacatacaca
cgtgagcttgcgagcgtggcgatcgaaaagaaggtgatcggcgatgcctctgacctcacg
aattcacacgagtttttattcaaccttcgatgtgaagattccggagtagaagtctattcc
cgagacaatattgtggtgaagaaagacggacagcaagtcatcgaagacattcctgttggt
gccgactgtacgttgagcgaaaaacagcctgagcaaaaaggcgtggattttgttgtcccc
gcgctgtcccctttccgtgcttcaactgccggcgacattgtcaaagtggttgtagataac
accgcaaaacgtcaattggctcctatttcagtaaagaaaatagtaaataaaaaagacaca
ttttctcctgaaatttccgcatcaatcgatgcattaaactacaaggtggtggcaaaatgt
acggttcctggtgaagaaactcctcgagaagtcatacaaacagtaagtaataatcaaact
gttgacttcggaagctttccagtaggaactacttgtagttttagcgagctcaccgaagcc
cctgccggaaccgcaatgagttatgaattctcgaacggtccagaggtgaaaattgaggac
tccactcctataaataaggtgctgacgaatacgtttgaaaacgcacgtggcgagctaaaa
gtaaccaaaaaagtcctctatggtgatatgcctcaagcattagtagaccagattccatcg
agctttactgtcagcgtcacatgctcaatcactggtggtcattccgtcactttgcaaaac
gatgaggagaaaaccgtacctggcgttgttgcaggtgatagctgcacattaagtgaggag
gtaactcctataactggtgctacccatcacaagcactggattaacggcgagctgcataaa
gttgcagattctacaaacatcacgattgaccctaatggtagtaacgcaattcgcttggaa
aaccattacgaaaccgatgatgtgcctttggaacttaccaaacatgttcgggtaatagac
cacactggaaatgacatcaacccggaactaaaaaatgccattgttcgaccagaccaatta
ttcctattccagtaccgttgtgaaatcaatggtcaagtagttgcagaaaataccttaagt
gccggagagattaacgtcggttccactaaggtgccacgaggatctacttgcacggtagaa
gaagatacctcttcggtggagctacccaatgcatcgttatctcgtgttgagttctccgtt
gacgggacaaagacgaatgataaggcatcgatagcaataaattcggatcaaaaccgacta
gatgctactaatactttcacgttgaagactggctcatttaacctgaaaaagaaagtcgat
ggtgaaggcgtatctactattcatgaagatcgacgctttgaacttgcgtatcggtgcacc
ttaggtgactggaagaaggaaggctccgttacgctgggacgttttgatagtgccgaatca
cattctgttaaagacattcccgtgggtgcatcatgtgagattattgaggactctgagaaa
gcccaagagccaaacgcacaagtgacagctcgttggacgcatacagacagcacgaatggc
tggggcgataccgaagccgcatgcgaaaatcatgcagcatgccaggttgatccaaataat
aagtttgcaaccacagtgatgattactgaaaatgagaaagagaatttccaaggaacattt
gttgtatggaacacctacacttacgataaaacaaaggtagagatcaacaaggtgttgacg
aatgatggtccagaacttgctggtaaagataactttgccttcaccttgaaatgtactgat
cctcgttttgcaggaagtgatttggcagataagcattccattccagaccccacaattaca
gttgcattaaatgctaaaggccaaagccgagcgtcgtaccaagttgcagacgaacggcac
gatagcgttgaggttcctgttgggtataactgcactgtgaccgaaaacccgattgcgctt
tatgatgccaaagcgacgacccaattcagtggtccggcagtggtggaaaatacggctgtg
caacgcacatcatcaaactccgcctcggctcgttttgtcacggagaaacaagaaaataat
ggcactcaaaaaattcaggtaactaatgattacattcgtccgcgcgccgatgtcatggtg
cataagacaatcgcaaaaccagaacactcggtagatccttggttgcttaacactacatac
agcatcacttataagtgcgacgatccatacatcaaggatcgttcctattcaaacgacgta
gatatacaagctgatgcagaaaaaccaacgccaattttcgctgatcctacggctcacgta
aaaattcctgcgtcggcagtatgtactttcagtgaaaacaccgaagggcatttaccagga
gaggtaaaaggcgtagtggatgaaacgaataaagttgctgaattcgctggggaacatgaa
aagcgctcctatttcaccccagaaattaaagatgttgttttgtcggaatctgaaccaaca
cgaattgaattcaccaattcatacgtgatgcctcaacgaattttgagcctacaaaaatat
gttgagggcgaccccggccatgctgtgattgctccagaagaaacatttgaattctcctac
acctgcaccatgccgcatctattcccaaatcaacccaatcctatgtcgcaggaagtagga
aacaaggttgcacgtggcgtcattaagattcgagaaggtgagacatggcgatctcctgaa
gtccctattggtacgtcctgcacgatcaaggaagaagacgaccccgccttgcgcaccaag
ttggaaaacaatgcgctgcgcatggtgcctacctacttgttccccacggagcgtgcagga
gctgctagtgcgccagtgattccgccgttgacagaccgtccgatttataacggcacggag
cctcgcctccagatgccagaatcaggcattgagcttaacgacgcccactcgcacaccgtg
gtgatcaacaacgtgtacaccactgacgctgagatcaacattgccaaggtgaacgccgat
aactctccgctgcccggcgcgcacttcgccatctatgggataggggagaatggccagcgt
aatgagttggctgaggttgcggatgtgccggcgcagtctgtggagcaggcgttgtttgcg
gtgcgcttgcgccctggtagttacgagttggtggagactcaggctcctcagggtgcgcag
ttgttgcctaagccctggcgttttgatgtcaaggctgcgaatgcgggtgcgatgggtgat
cttgaggtgaccttggataactatgatgctgattctggtttgatcacagtggagcgcccg
cagggtaagccgtggttgatcaaggtggctaatgtgtcggcatccacactgccattgact
ggttcgaatggttacttgcggtggctgttggccggtgctgcgggcctgttggtggcagca
gcactgtggctagtggcgcgtcgtaagcgttag
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