Candida dubliniensis: CD36_16350
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Entry
CD36_16350 CDS
T01140
Name
(RefSeq) TFIIH subunit, putative
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cdu
Candida dubliniensis
Pathway
cdu03022
Basal transcription factors
cdu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CD36_16350
09124 Replication and repair
03420 Nucleotide excision repair
CD36_16350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdu03021
]
CD36_16350
03400 DNA repair and recombination proteins [BR:
cdu03400
]
CD36_16350
Transcription machinery [BR:
cdu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CD36_16350
DNA repair and recombination proteins [BR:
cdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CD36_16350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Anillin_N
IBR
Motif
Other DBs
NCBI-GeneID:
8045684
NCBI-ProteinID:
XP_002418116
UniProt:
B9WAJ6
LinkDB
All DBs
Position
2:complement(272641..274146)
Genome browser
AA seq
501 aa
AA seq
DB search
MDDSDEEYMGSKSPSSKLSSTAPETSSSPGAKSGVSARTRSSRRGEVSDLKGANGYAWED
EYQRSWDIVKDDEQGGNSFEAMVQSIIENRKKKIMKNPSTPFQRGIIRTLIIIIDGSSAM
SEKDLRPSRLSMTLNYLQEFVVEFFDQNPISRLGIILMRNGVANLVSEVSGSPQYHVDKI
RNLKARQHNRFEPKGDPSLQNSLEMARSLLKFNFGSTSNNSKNSKEILVIFGALFTSDPG
DIHKTIDSLVKDEIKTSVIGLSAQVAICQELVNRTNKEPRNSQSKHYGVIMNESHFKELL
MESVTPLPLTESEKQIQESEQNGVPVLRMGFPTKVQPTLTSAIGGSDYIIEFPHLNASFP
TQGSEDSKDVVEIQTNKPAAASSLIGYQCPQCKCKVCNLPTICPVCGLMLILSTHLARSY
HHLVPLAPYKEVKVSPIYDSTYCFGCQLKFPEGVKLGTLKKSLESMTSSRYRCLKCSQDF
CINCDVFVHEVLHNCPGCENN
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggatgattcagatgaggaatacatgggctctaaatcgccatcctccaagctttcctcg
actgctcctgaaacaagttcttcgcctggggcaaagagcggtgtttcagcaagaactcga
tcttcgcgtcgtggtgaagtaagtgacttgaaaggggccaatgggtatgcttgggaagat
gaataccaacgatcctgggatattgtgaaagatgacgaacagggaggcaattcatttgaa
gcaatggtacaatcgattattgaaaatagaaagaagaagataatgaaaaaccccagtact
ccatttcagagaggaattattcggacattaattattattatagacggatcactggccatg
agtgaaaaggatttacgaccttcaaggctatccatgacattgaattatttgcaagagttt
gttgttgagttttttgaccagaaccctatatcgcgattggggataatattgatgagaaat
ggggtggccaatttggtcagtgaggtcagtggtctgccacaatatcatgttgataaaata
agaaacttgaaagccagacaacataataggtttgaaccaaagggcgacccttctctacag
aattctttggaaatggccagatctttattgaagtttaattttggttctacatccaataat
tcaaaaaattcaaaagagatattggtgatatttggagcattatttacaagtgatcctggc
gatattcacaaaacgatagacagtttagttaaggatgaaataaagacgagcgttataggg
ttatctgcgcaagtggctatttgccaagagttagtaaaccggactaataaagagccacgt
aattctcaatcaaaacactatggtgttataatgaatgaatctcatttcaaagaattattg
atggaatccgtgactccgttgccattgaccgagagtgaaaaacaaatccaagaatcagag
caaaacggtgttccagtattacgaatggggtttccaaccaaagtgcaaccaaccttgaca
tctgctattggtggttctgactacataattgagttcccacatctaaatgcttccttccct
actcagggttctgaagattccaaggacgttgtggaaattcaaacaaataagccagcagca
gcatcttccctaattgggtatcaatgccctcaatgcaaatgcaaagtttgcaatttgcct
acgatatgccccgtgtgtggactaatgctaatattatcgactcatttggcaagatcatac
catcatttagtccctcttgctccctataaagaggtgaaagtgagtccaatctacgacagc
acgtactgctttgggtgccaattgaaattccctgaaggtgttaagctaggaacactcaag
aaaagtttagagtccatgaccagttcacgctatcggtgtttgaaatgttcacaggacttt
tgtataaactgtgatgtatttgtccatgaagttcttcacaactgtccaggttgtgaaaat
aattag
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