Candida dubliniensis: CD36_17800
Help
Entry
CD36_17800 CDS
T01140
Symbol
CaLIG4
Name
(RefSeq) dna ligase, putative
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cdu
Candida dubliniensis
Pathway
cdu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CD36_17800 (CaLIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdu03400
]
CD36_17800 (CaLIG4)
Enzymes [BR:
cdu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CD36_17800 (CaLIG4)
DNA repair and recombination proteins [BR:
cdu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
CD36_17800 (CaLIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
RNA_ligase
mRNA_cap_enzyme
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
8045817
NCBI-ProteinID:
XP_002418257
UniProt:
B9WAY7
LinkDB
All DBs
Position
2:618662..621448
Genome browser
AA seq
928 aa
AA seq
DB search
MTYFLNDIHPPSPNDITPTFTLLTKELFDKFDGVRKDSLGDFRTVTEKKAFIIKTFLNTF
RTHIGNDVYPSAKLIFPEKSGRIYFIKEVALARLLIKVYKIPKESEDYITLHDWNKSYQR
SRRFSIDEKKIRDLPLQASRIISKRRPIVDNVEEYTIPQINSSLDQLALEKSSQGQIDIL
KPLFDNLGIPEVRWLIHIILNKSILTNMERFFFNTWHPDGYRVFSICNDLQKAFQFSTNP
DLRLEPSQLAIHPCFKFKPQLSERLTTSYKTLVKKLQRKHEMDVPYEKKFQELGLENKFY
IEEKMDGDRMLLHKDGDSFKFFSRRLKDYSYLYGESFQFGALTKFLAHAFAGNVQSVILD
GEMVAYDYERNVILPFGTLKSSAIQESVRQFTTIDQYEQQTAYPFFLVFDVLFLNGKDLT
NYPLFFRKNILSRILRPIPNRFEVLDTRLGSSPEDIERAIREVVSSRCEGLVLKNVQSKY
EIDGFRNPDWIKVKPEYLEKFGENLDLVVIGKSPAIKNSYMCGLKSVTDGVYYSFCTCAN
GIEIEEFDKIERLTHGKWIKTDTTMPPESLIKFGTKIPTFWIHPSDSLVLEIRARSIDTR
AGTSYAVGSTLHNNHCRKIREDKTIDECVTLQEYTHIKANYINDLNKAQTALGKKRESMY
SLDNESKLKKVKVESDLFDGMEFLIMSDKREADGEVTTIEEMKAMVKSYGGKIVNSIDLA
TNYQIVVITERELPVSSQYLSKGIDLVKPIWIYECIQRGCVLQLEPYFIFASKNWDNFRN
MVDQYGDSYIIHHPLNIVVPNLSESELEELRNSFDWGELKPLIYLFKGLSFYVCGNNLSA
QFLKERIKRFSGDLSKHYTECCYIVIPDKHSRPLILSEIDKMSNQISREMVIDENGRSSR
IPYFVTEAFVQTSIKMNYIPDPEDYKFR
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgacatacttcttaaacgatatccacccaccttctccgaatgatatcactcccacattc
acattattgactaaagaattgtttgacaaatttgacggagttagaaaggacagccttgga
gattttcgaactgtcactgagaaaaaagcgtttataattaaaactttcttaaacacattt
cgaacgcatattggtaatgacgtatacccttcagcaaagctaatattcccggaaaagtcg
ggcagaatatacttcattaaagaagtggcattagcgcgtcttttgatcaaagtctacaag
atcccgaaagaatcggaggattacatcacgttgcacgattggaacaagctgtaccaaagg
tcaagacgattttccatcgatgagaaaaagattcgtgatttaccattgcaagcatcaagg
attatttccaaaaggagaccaattgtggataatgtcgaagaatataccataccacaaatc
aattcttctttggatcagttggcattggaaaagctgtctcaaggtcaaatagatattctt
aaacccttatttgataatctaggaattccagaagtaagatggctaattcatataatactt
aataaatcaattttaaccaacatggagaggttttttttcaacacttggcatccagatggc
tacagggtgtttagcatatgcaatgacttacagaaggcatttcagttttctacaaacccc
gatttgagactagaacctctgcaattggcaatacacccttgtttcaagtttaagccccag
ttgtcggaaagattgacgaccagttataaaacacttgtgaaaaagttgcaaagaaagcat
gagatggatgttccgtatgagaaaaaatttcaagaattgggattggaaaacaaattttac
attgaagagaaaatggatggcgatcgtatgcttcttcataaggatggtgacagcttcaag
tttttttcaagacgcttgaaagattactcttatttatacggagaaagtttccaatttggg
gctctaacgaaatttttagcgcacgcttttgctggaaatgtacaatctgttatactagat
ggtgaaatggtggcctatgattacgagcggaatgtaattcttccatttggaactttaaag
tcgctggctatccaagaaagtgttagacagttcacaactatcgaccaatatgaacaacag
acagcatatccatttttcctcgtgtttgacgttttgtttttgaatgggaaagatttaacc
aattatccattattcttccgcaaaaacattttgagtcgaatacttaggccaatacccaat
agatttgaagtcctagatacacgactaggttcttctccagaagatatcgaaagagcaatc
agggaagttgttagtagtcgatgcgaaggtctagtattgaagaacgtgcagctgaaatat
gaaattgatgggttcagaaacccagattggattaaagtcaaaccagagtatttagagaaa
tttggtgagaatttggatcttgtggtgattggcaagtctcctgccataaagaactcgtat
atgtgtggattgaaaagtgtaactgatggagtttattacagtttttgtacttgtgccaac
ggtatagagattgaggagtttgataaaatcgaaagacttactcatggaaagtggattaaa
acggatacaacaatgcctcctgagctgttgattaaattcggaactaaaattcccactttt
tggattcatcccagtgactcattagttttggaaattagagcccgttcaattgacacccga
gcgggtaccctgtatgctgttgggtcaacactacataacaaccattgccgaaaaattaga
gaggataaaactattgatgaatgtgtgacattacaggaatacacgcatatcaaagcaaat
tatataaatgatttaaataaggcacaaactgcattggggaagaagcgtgagtcaatgtac
tccttagataatgagctgaaattaaagaaagtgaaggttgagtctgatttgtttgatggg
atggagtttttgattatgagtgataaaagagaggctgatggtgaagttactaccattgaa
gagatgaaagcaatggttaaactgtatggcggaaaaattgtcaattcgattgatcttgcg
acaaactaccaaatagtggtgatcactgaacgagaacttccagtatccagtcaatatcta
agcaagggaattgacttggtgaaaccaatctggatatatgaatgcattcaaagaggatgt
gttcttcaactagaaccatatttcatatttgccagtaaaaattgggataattttagaaat
atggtcgatcaatatggagattcgtacattatacaccatccgttaaatattgttgttccc
aatctaagtgaaagtgaacttgaagagcttcgcaatagttttgactggggcgaacttaaa
cctttgatttatttgttcaaaggattatcattttatgtctgcgggaataacttgagtgcc
cagtttttaaaggaacgaattaagagatttagtggagatttgtcgaaacattatactgaa
tgttgttatatagtaatacctgataaacattccagaccattgatactttctgaaattgat
aagatgtcaaatcaaatttctcgtgaaatggttattgatgaaaatggtaggtcttcaaga
attccatattttgttactgaggcattcgtgcagacgtcaattaaaatgaattacattcct
gaccctgaagattacaagtttaggtga
DBGET
integrated database retrieval system
