Candida dubliniensis: CD36_74000
Help
Entry
CD36_74000 CDS
T01140
Name
(RefSeq) ATP-dependent DEAD-box RNA helicase, ribosome assembly, putative
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
cdu
Candida dubliniensis
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdu03041
]
CD36_74000
03009 Ribosome biogenesis [BR:
cdu03009
]
CD36_74000
Enzymes [BR:
cdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CD36_74000
Spliceosome [BR:
cdu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CD36_74000
Ribosome biogenesis [BR:
cdu03009
]
Eukaryotic type
Pre-60S particles
Helicases
CD36_74000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
8049088
NCBI-ProteinID:
XP_002421607
UniProt:
B9WJZ3
LinkDB
All DBs
Position
7:complement(1007325..1009103)
Genome browser
AA seq
592 aa
AA seq
DB search
MSDLIYTIDSDEEVALSASDTEETNPDFHFQIDSGTTNTVEEFDFQDKKLAEVDLDAIIQ
KKGIQLPEDEQAVDESDESDQEVDIPETKEAVQPEDTPEEIANFYEQSTHQSHTSFQTLQ
LSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKP
STSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIA
TPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQEELTEILSLIPKHKRQTLLFSAT
MNTRIQDLIQLSLQKPVRIMIDPPKQVASKLLQQFVRIRKRDHLKPALLYQLLKGVSTRV
VVFVARKETAHKLRIVLGLLGLKVSELHGALSQEQRLQNVKNFKSLDVPVLICTDLAARG
LDIPKIELVINYDMPKTFEIYLHRVGRTARAGRDGTSITFVGESSQERAIVKAAIVNGKG
VAKTVDWNQAEQTSKIISSKESVIDEVLQEEKEAKELLRAEMELTKASNLIKHEQEIHSR
PKRTWFKGEVMEHLTKHGKKVNAKKRKANEEGRSYKKTKTDRMKISNKKKSK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctcatatatactatagactccgatgaggaagttgcattgtctgcctccgac
acagaagaaaccaacccagacttccatttccaaatagactctggcacaactaacacagtg
gaagaatttgatttccaagacaaaaaactcgcagaagtcgatcttgatgcaatcatccag
aaaaagggaatacaactaccagaagacgagcaagcagtagatgaatctgacgaaagcgat
caagaagttgatatcccagaaacaaaagaggcggtacaaccagaggacacacccgaagag
attgccaacttctacgaacagtctacccaccaatcccacacctccttccagaccctccaa
ttatcccgtccggtccttaaaggcattgccgaactcaagttcactaaaccaacccctatc
caatctgccagtatccccatcgcattgcttggaaaagacattgttgccggtgcccaaacc
gggtcaggtaaaaccggcgcatacatgatccccatcatcgaaagattactctacaaacca
tcaacctccaccaaagtcatcatcttaacacctaccagagagttggcactacaagtctac
gagtttggcaaaaaattgtcgcaccacgtcaacaaccttaacattggtcttgcagtcggg
gggttaaacttacgtcaacaagaagaacaattgaaaacccgtcctgacattgtcattgca
actccagggagacttatcgaccatatccgcaacagcccttccttcagcgtacaagatatc
caggtgttggtcattgacgaggccgatagaatgttggaagaagggttccaggaagaactt
accgaaatcttatccctcatccccaaacacaaacgccagaccctattgttttccgctacc
atgaataccagaatccaggacttgatccagttgtcattacaaaaacccgtgcgtatcatg
atcgacccaccaaagcaagtagcctcgaaattattgcagcagtttgttcgtatcagaaaa
agagaccacttaaaaccagcgttgctataccagctattaaaaggagtatcaaccagagtt
gtcgtttttgtggctaggaaagagaccgcacacaaattacgtattgtgcttggccttttg
ggtctaaaagtttctgaattgcatggtgcattatcccaagaacaaagactacaaaatgtt
aaaaacttcaagtcattggacgtccccgtcttgatatgtaccgatttggccgcaagaggg
ttggatatccccaaaatcgaattggtcatcaactacgacatgccaaaaacgtttgaaatc
tatttgcacagagtgggtagaaccgccagagctggaagagacgggacctccattacattt
gtaggtgaatcaagccaagaaagagctatcgtcaaggcagccatagtcaacggcaaaggg
gtcgccaaaaccgtcgactggaaccaagccgaacaaaccagcaaaatcatatcctccaag
gaatcggtcattgacgaagttttgcaggaagaaaaagaggcaaaagaattacttcgtgcc
gagatggaactcaccaaggcctccaaccttatcaagcacgaacaggaaatccactcccgt
ccaaaaagaacttggttcaaaggcgaggtcatggaacacctcaccaagcacggcaaaaaa
gtaaatgcaaaaaagagaaaggctaacgaagaaggcagatcgtacaagaaaaccaaaacc
gatagaatgaaaatctcaaacaagaagaaaagtaaatag
DBGET
integrated database retrieval system
