Candida dubliniensis: CD36_86690
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Entry
CD36_86690 CDS
T01140
Name
(RefSeq) pre-mRNA-processing ATP-dependent RNA helicase, putative
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cdu
Candida dubliniensis
Pathway
cdu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CD36_86690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdu03041
]
CD36_86690
Enzymes [BR:
cdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CD36_86690
Spliceosome [BR:
cdu03041
]
Complex A
U2 snRNP components
U2 related factors
CD36_86690
Complex B
CD36_86690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
8046957
NCBI-ProteinID:
XP_002419569
UniProt:
B9WEQ2
LinkDB
All DBs
Position
3:1597486..1600107
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AA seq
873 aa
AA seq
DB search
MSIDNETSTALRNSGQEVKNDTNQTSELSKEEKLRKRREQLELWRQKKQQQQAQNKVTKI
EDNTNNGSTDEVKKTRQQRIEEWKRARLQKQQATKEKTTTITIKKKVHQPTTRSTLKRNL
DFGDDEDEMKNSHRPVFKKPSLEYDEISEHQEDKESEDELDAFLASIRESELKSDDTKAE
KSIKSVREDDNHSLADDEEEEEVDEESRLQELISTKLTKLQNKGKELQSIDHSHENYQEF
RKVFYNETYELSSLSNEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDKL
KFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIHDQQFLKDNQGPIGLI
LSPTRELALQIEKEILNFTKKNNYLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDL
LAANSGRVTNLKRCTFVVLDEADRMFDLGFEPQVNKIFTQIRPDRQTVLFSATFPRKMET
LAKQILADPVVIIVGGISVVAPEIKQDVILFETSLEEQDKYKQQRIEKLHDILSNYQIER
PDSKILVFTEKQNDADELVANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIA
TSIAARGLDVRNLGLVINFDPPNHMEDYVHRVGRTGRAGAKGNAVTFVSSSQPKEVFNLV
KALKLSHSDIDPKLEEIANKFINKVKAGKEKIGSGFGGKGLDNLQEVRDNKLKLEKQRFG
DQQPPQNQQEETETKKPNNEPATDIALPEFNIIEGNTPETSGPDKCKFYCRIVINDLPQK
VRWNIVQRENLSKIIDESRTSITTRGQYYPPGSKPLSNDQERSGSLAKLYLLVEGLTLQS
VTEAITLIKKKMLESLDIMNQRENLQPTGRYVV
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgataatgaaacactgactgctttgagaaatagtggtcaagaagttaaaaat
gatactaaccaaacaagtgaattatcgaaagaagaaaaactaagaaaacgtagggaacaa
ttagaattatggaggcaaaaaaagcaacaacaacaggctcagaataaagtaacgaaaata
gaagataataccaacaatggcagtactgatgaagttaaaaagactcgtcaacaaagaata
gaggaatggaaacgagccagattacaaaaacaacaggcaaccaaagagaaaaccacaact
atcacaattaagaaaaaagttcatcaaccaacaactagatcaacccttaagagaaatttg
gattttggcgacgatgaagatgagatgaaaaattcacatcgacctgtcttcaagaagcca
agcttggagtatgatgagatactggaacaccaagaggataaagagtctgaagatgaattg
gatgcttttcttgcctccattcgtgaatcggaattgaagtcagatgatacaaaagccgaa
aaatctataaaaagtgtacgtgaagatgacaaccacagtctcgctgatgatgaggaggaa
gaggaagttgacgaagaatcaagattacaagagttgatttccacaaaattgacaaaactt
caaaacaaaggtaaagaattacaatcaatagatcattcacacgaaaactatcaagagttt
cgcaaagttttctataatgaaacttatgaactactgtccttactgaatgaacaagtagaa
ttaattagacaagaccttgataatataaaagtcaaaggtacagatgttccacgaccaata
ctaaaatggagtcatttggcattaccgacaaatctatcttcggtaattcatgataaattg
aaatttgaaaaaccatcggcaattcaaagccaggcattgccaacaattttgtctggtcgt
gatgtgattggaattgccaaaacagggtctgggaaaacattatcgtatgtattacctatg
cttagacatatacatgatcaacagtttttgaaagataaccaaggccctattggattaata
ttgagtcctacacgtgaattggctttacaaattgaaaaagaaatactaaactttaccaaa
aagaataattatctaagagtatgttgttgttatggaggcagttctattgaaaatcaaatt
aatgaattgaaaaaaggtgttgaaataattgttggtactccaggtagagtcattgacttg
ttagcagctaattccggaagggtgacaaacttgaagagatgtacatttgtggtactagat
gaagcagatagaatgtttgatttggggtttgaaccacaagtaaataaaatattcactcaa
atcagaccagatagacaaactgtattgttttcagccacattccccagaaaaatggaaaca
ttagcaaaacagattttggcagacccggttgtaataattgtgggtggtattagtgtggtt
gctcctgagattaaacaggatgttatcttatttgagacctctttggaagaacaggataaa
tacaagcaacagcgcattgagaagttgcacgatatattatctaattatcaaatagaacgt
cccgattctaagattctagtatttactgagaagcaaaatgatgccgatgagttggttgcc
aatttattatcaaacaaatatcctgctattgcaatacatggtggtaaagatcaaatggat
agaaaatacgctattaaagaatttgctagtatggatagtggtattaatattttgattgcc
acttctatagctgccagagggttggatgttagaaatcttgggttggttattaattttgac
ccaccaaatcatatggaggattacgttcatcgagttggtagaacaggtagggctggtgcc
aaggggaatgctgttacatttgttagttctagtcaaccaaaagaagttttcaatttggtg
aaagctttaaaattgagtcattctgatattgatcctaaattagaggaaatagctaacaaa
tttatcaataaagttaaagcaggcaaagaaaaaattggttctggatttggtggtaaaggt
ttagataacttgcaagaagtgagagacaataagttgaaattagaaaaacaaagatttggt
gatcaacaaccgccacagaaccaacaagaagaaacagagacgaaaaaaccaaataatgaa
cctgcgacagatattgccttacctgaattcaatatcattgaaggtaatactccagaaaca
tcaggtccagataaatgtaaattctattgtagaattgttattaatgatttacctcaaaaa
gtgaggtggaatattgtgcaacgagagaatttgtctaaaataattgatgagtcaagaacc
tcaataacaactagaggtcaatattacccaccaggctcaaaaccattatccaatgatcaa
gaaagaagtggcagtttagcaaaattatatttgttagttgaggggttgacactacagtca
gttaccgaggctattactttgatcaagaaaaaaatgttggagagtttggatattatgaat
caaagagaaaacttacaaccaactggaagatatgttgtatga
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