Cellvibrio sp. PSBB023: B0D95_07280
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Entry
B0D95_07280 CDS
T04725
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ceb
Cellvibrio sp. PSBB023
Brite
KEGG Orthology (KO) [BR:
ceb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ceb03016
]
B0D95_07280
Enzymes [BR:
ceb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
B0D95_07280
Transfer RNA biogenesis [BR:
ceb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B0D95_07280
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Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
AQT59910
UniProt:
A0A1U9N9E0
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All DBs
Position
1627984..1629978
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AA seq
664 aa
AA seq
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MLNKDALQQLSQLKSSIVAAKDIAQGTVRTTTKRFGFLILDDGREAFIDPEQMMRVLPDD
RVEAEINTNSKGQFEAKLTQLIKPGLSEFVGKYVNKGSTDFVEPDVPNFNRWLFIPPQER
KGYKVGDLIHCSIARHPFNSEGKTQVHILNRIGTPDEPGVESRYTIAKFQMPFEWQSQAQ
SQAGGINWSPLTFDNGELDLTHLPFVTIDSENTRDMDDAIYIATTEAGWELITAIADPSK
HIEFGSPLELAARARASTHYLLGQTVTMLPVDLSHDTYSLVPEQKRPALICRMHIGRDGT
INQFEFAEALIRSQSKLSYQGVYDALTAEVSSLGAPAHIHDMLVELKAFAQARAQYRQQH
ALVMEDRPDYAFVLNDVKKIDHIEKRERNIAHRMIEEAMLVTNICAGELFLQHPGCGIFS
SHVGFRPERLNDALSLIQEDRPDLTPGDLTKLEHFTTLFRELRLNADNNPVNSRLHSLLQ
RMLQAGSLTFDPVAHFGLGFNAYAMVTSPIRRYNDLFNHLAIKRILRGQPPLELNDKKQF
AEQLQQQLNNGRQACRYVESWLGCQYANQHVGSVHSGSIALVNSFGIGIKLDDWGLDGYA
LLAPKDGEVKAQFDSRRLSLTIEGNTYRLDDKVHVLVNNVDIEKRKINLELISEETASRL
SVWL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgctcaataaagatgctctacaacaactctcacaattaaagtccagcattgtcgccgct
aaagatattgcccagggaacggtgcgcaccaccaccaagcgttttggctttttgattctg
gacgatgggcgcgaggcatttattgaccccgagcagatgatgcgcgtcctgcccgatgac
cgggtcgaagcagagatcaataccaacagcaaagggcaatttgaggccaaactcacccaa
ctcatcaaaccgggcctgagtgaatttgtcggtaaatacgtcaataaaggctctaccgat
tttgtcgagcccgacgtgcccaacttcaatcgctggttgtttatcccgccgcaggaacgt
aaaggttataaagttggcgatttaattcactgcagtattgcgcgccatccatttaatagt
gaggggaaaacccaggttcatattttgaatcgcattggtaccccggacgaacctggcgta
gaaagccgctacaccatcgccaaattccaaatgccctttgagtggcagtcgcaagcacaa
agccaggctggcggcattaattggtcgcccctgacgtttgataatggcgaactggattta
acccacctgcctttcgtgactatcgattcggaaaacacccgcgatatggacgatgcgatt
tatatcgctaccacggaagccggctgggagctgattacggcaattgccgatccaagcaaa
catatcgagtttggcagcccactcgaactggcggcacgcgcacgcgccagcacgcattac
ctgctaggccaaaccgtgactatgctaccggtggacctatcgcacgacacttactcactg
gtaccggaacaaaagcgcccggcattaatctgtcgcatgcacattggccgcgatggcacc
atcaatcagtttgagtttgccgaagcgctaatccgctcgcaatccaaactgagttaccag
ggtgtatacgatgcgctcacagcagaagtctccagtttgggagcgcctgcccatatccac
gatatgctggtagaactcaaagcctttgcacaggcacgcgcgcagtatcgccaacagcat
gccctggtaatggaagatcgtcctgactatgcctttgtgttaaacgatgtgaaaaaaatt
gatcacattgaaaaacgcgagcgcaacattgcgcaccgcatgattgaagaggccatgctg
gttaccaatatctgcgcgggggaattatttctgcaacatccgggctgcggcattttttcc
agccatgttggctttcgccccgagcgcctgaacgatgcattgtcattaattcaggaagat
cgccccgatctgacacccggcgacctgaccaaactggaacacttcaccaccctgtttcgc
gaactgcgtttgaatgcagacaacaacccggtgaatagccgattgcattctcttttacag
cgtatgctgcaagcaggttcactaacctttgacccagttgcacactttggcttgggtttt
aacgcctatgcgatggttacctcacccattcgtcgctataacgacttgtttaatcacctg
gcgattaaacgtattttacgcggacaaccgccactggaattaaacgacaaaaaacaattt
gccgagcaattacagcaacagttaaacaatggccgccaagcttgtcgctatgttgaaagt
tggctcggttgccaatatgccaaccaacatgtgggcagtgtacacagtggcagtattgcg
ctggtgaactccttcggcataggcatcaaactggatgactggggattggacggctacgcc
ctgctagcccccaaagatggcgaggtaaaagcccagttcgattcgcgccgcttaagcttg
acgattgagggcaatacctatcgcctggatgataaagtccatgtgttggtgaataatgtg
gatatcgaaaaacgcaaaatcaatctggaattgattagcgaagaaaccgcctcgcgctta
agtgtctggctgtaa
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