Dickeya fangzhongdai ND14b: LH89_12010
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Entry
LH89_12010 CDS
T03347
Name
(GenBank) DNA-3-methyladenine glycosidase
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LH89_12010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ced03400
]
LH89_12010
Enzymes [BR:
ced01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
LH89_12010
DNA repair and recombination proteins [BR:
ced03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LH89_12010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
RBD
DUF3613
Motif
Other DBs
NCBI-ProteinID:
AIR69893
LinkDB
All DBs
Position
2726290..2726850
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AA seq
186 aa
AA seq
DB search
MTRCGWVTQDTLYLDYHDNEWGKPCTDGRELFELLCLEGQQAGLSWITVLKKREHYRRCF
HGFDPHRVAAMTDDDVNRLVLDPGIIRHRGKIEAIIRNARAWLAMQQQGEDFAAFIWSFV
NHQPVVNRHASLADVPAKTTVSDAMSKALKKRGFTFIGSTICYAFMQAAGLVNDHTAECF
CHPEAS
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgctgtggttgggtcacgcaggacacgttgtacctggattatcatgacaacgag
tgggggaagccctgtaccgacgggcgggaactgtttgaactgttgtgtcttgaaggccag
caggccgggctgtcgtggataaccgtgctcaaaaaacgggagcactaccgccgctgcttc
cacggatttgatccccatcgcgtcgccgccatgaccgacgacgacgtaaaccggctggtg
ctggaccccggcatcatccgccaccgcggcaaaattgaagccatcatccgcaatgcccgc
gcctggctggcgatgcaacagcaaggggaagacttcgccgcttttatctggtccttcgtc
aaccaccaaccggttgttaaccgacacgcctcgctggccgacgtgcccgcgaagacaacg
gtgtcggacgcgatgtccaaggcgctgaaaaaacgcggctttaccttcatcggctcgacc
atctgctacgcctttatgcaggccgccggactggtgaacgaccataccgccgaatgcttt
tgtcatccggaggcgtcgtga
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