KEGG   Dickeya fangzhongdai ND14b: LH89_13820
Entry
LH89_13820        CDS       T03347                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
ced  Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:ced00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ced03400]
    LH89_13820
Enzymes [BR:ced01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LH89_13820
DNA repair and recombination proteins [BR:ced03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LH89_13820
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1
Other DBs
NCBI-ProteinID: AIR70225
UniProt: A0AA90WUH1
LinkDB
Position
3129103..3131127
AA seq 674 aa
MRMNPSQQHAVEFVTGPCLVLAGAGSGKTRVITQKIAHLIRGCGYQARHIAAVTFTNKAA
REMKERVAQTLGRQETRGLLIATFHTLGLEIIKREYAALGMKSNFSLFDDQDQMALLKEL
TELWLQNDKDLLQQLVSALSNWKNDLIDPAQAAALARSERDRLFAHCYRLYDEHLRACNV
LDFDDLILLPTLLLKRNEEVRERWQNRLRYLLVDEYQDTNTSQYELVKLLVGSRARFTVV
GDDDQSIYSWRGARPQNLSLLQQDFPQLQVIKLEQNYRSSGRILKAANILIANNPHVFEK
RLYSELGYGEELKIITANNEDHEAERVVGELIAHHFIRKTQYGDYAILYRGNHQSRLFEK
VLMQNRIPYRISGGTSFFSRPEIKDLLAYLRVLTNPEDDSAFLRIVNTPKREIGPATLQK
LGEWANQRNRSLFNASFDMGLSQTLSGRGLESLQRFTQWIGEIARLAEQEPVKAVRDLIH
GLDYESWLYETSPSPKAAEMRMKNVNTLFTWMTEMLEGSDLDEPMTLTQVVTRFTLRDMM
ERNEAEEELDQVQLMTLHASKGLEFPYVYLVGMEEGLLPHQTSIDEDNVDEERRLAYVGI
TRAQKELTFTLCRERRQYGELIRPEPSRFLLELPQDDVMWETERKVASPQERMQKGQNHL
ANLRAQLAKARDKE
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgcgcatgaatcccagccaacaacacgccgttgaatttgtgaccggtccctgtctggta
ctggccggggcgggatccggcaagacccgggtgattacccagaaaatcgcgcacctgatc
cgcggctgcggttatcaggcgcgccatatcgccgcggtgacctttaccaacaaggccgcg
cgggagatgaaggagcgtgtggcgcagacgttggggcgtcaggaaacccgcggtctgctg
atcgccaccttccatacgctggggctggagatcatcaagcgcgaatacgccgcgctgggc
atgaaatccaacttttcgctgtttgacgatcaggatcagatggcgctgctgaaagaactg
accgagctatggttgcagaatgacaaagacttgctgcaacagctggtgtccgccctgtcc
aactggaaaaacgatctgattgacccggcacaggcggcggcgctggcgcgctcggaacgg
gaccggttgttcgcgcattgctaccgcctgtatgacgagcatctgcgcgcctgcaacgtg
ctggactttgatgacctgatcctgttgccgacgttgctgctcaaacgtaatgaagaagtg
cgtgagcgctggcagaaccgcctgcgctatctgctggtggacgaatatcaggacaccaac
accagtcagtacgaactggtgaagctgctggtgggcagtcgggcgcgttttaccgtggtg
ggcgatgacgatcagtcgatttactcctggcgcggcgcccgcccgcagaacctgtcgctg
ttgcagcaggatttcccgcagttgcaggtcatcaagctggagcagaattaccgctcgtcc
ggccgtattctcaaggccgccaacatcctcatcgccaacaacccgcacgtgttcgaaaag
cggctttactccgaactgggctatggcgaagagctgaaaatcatcaccgccaataacgaa
gaccacgaagccgagcgggtggtgggggaactgattgcccatcacttcatccggaaaacc
cagtacggcgactacgctattctctatcgcggcaaccatcagtcacggttgtttgaaaaa
gtgctgatgcaaaaccgcattccttatcgcatttccggcggtacgtcgtttttctcccgg
ccggaaatcaaggatttgctggcttatttgcgcgtgctgaccaacccggaagacgacagc
gcgtttctgcgcatcgtaaatacgccgaagcgcgaaatcggcccggcgacactacagaag
ctgggggagtgggccaatcagcgtaatcgcagcctgtttaacgccagcttcgacatgggg
ttgagccagaccctgagcggacgcgggctggagtcattgcagcgtttcacccagtggata
ggcgagatagcccgactggcggagcaggagccggtgaaggcggtgcgcgatctgatccac
ggtctggattacgaaagctggttgtacgaaacctcgccgagcccgaaagcggcggaaatg
cgcatgaaaaacgtcaatacgctgtttacctggatgacggaaatgctggaaggcagcgac
cttgacgaaccgatgacgctgactcaggtggtgacccggtttaccctgcgcgacatgatg
gaacgcaacgaagccgaggaagagttggatcaggtgcaattgatgacgttgcacgcctcc
aaggggctggagttcccgtatgtgtatctggtggggatggaagaggggctgctgccgcat
cagaccagtatcgatgaggataatgtcgacgaggaacggcgtctggcttacgtgggcatt
acccgcgcgcagaaagagctgactttcaccctgtgccgcgagcggcggcagtacggtgag
ttgattcgcccggagccgagccgttttctgctggagttgccgcaggacgatgtgatgtgg
gaaaccgaacgtaaggtcgccagcccgcaggagcggatgcagaaagggcagaaccatctg
gctaacctacgcgcccagttggcgaaagccagagacaaagagtga

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