Corynebacterium endometrii: CENDO_01365
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Entry
CENDO_01365 CDS
T06552
Symbol
rfbC
Name
(GenBank) putative dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
cee
Corynebacterium endometrii
Pathway
cee00521
Streptomycin biosynthesis
cee00523
Polyketide sugar unit biosynthesis
cee00541
O-Antigen nucleotide sugar biosynthesis
cee01100
Metabolic pathways
cee01110
Biosynthesis of secondary metabolites
cee01250
Biosynthesis of nucleotide sugars
Module
cee_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cee00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CENDO_01365 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CENDO_01365 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CENDO_01365 (rfbC)
Enzymes [BR:
cee01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
CENDO_01365 (rfbC)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CENDO_01365 (rfbC)
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GFIT
Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
NAD_binding_4
Polysacc_synt_2
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QCB27575
UniProt:
A0A4P7QDG0
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All DBs
Position
complement(296259..297596)
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AA seq
445 aa
AA seq
DB search
MIDGLKIFDLDVHGDERGWFKENWQRSKQLEQGLPDFGPVQNNISFNAERGVTRGLHAEP
WDKYISVATGSVMGAWCDLREGSPTYGHTYTHRIDAATAVFVPRGVANGFQALEDNTTYT
YLVNAHWSPDAAYSFVNLDMIDWPLEPTEVSEKDKHHPQLADAVPVPPRKILVTGANGQL
GRALKAVYGDAAHVEYCTRAEFDITNPPARDWAQYQAIINCAAFNDVNGAEERRAEAWAV
NASAPAKLATIASEHNLTLVHVSSDYIFDGTRELHTEEEIPSPLSLYGASKAAGDTAAQT
TPKHYVIRTAWVFGEGKNFIRTMADLAAKDVEPRVIHDQRGRPTYAEDLAKAIKHLLETG
AEYGVYNVTSGGDAVGRDEIAMAAFIAVGKDPAGVHPVTTQQYREIAGPEADRPAESTLD
LSKIEATGFTPMNWRAAVALYLALG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgattgacggcttaaagatctttgacctcgacgttcacggggatgagcgtggttggttc
aaggagaattggcagcgctccaagcagctggagcaggggctaccggacttcggcccggtg
caaaacaatatttccttcaacgccgagcgcggggtaacccgcgggctgcacgccgagccc
tgggataagtacatctccgtagccaccggttccgtgatgggcgcgtggtgtgacctgcgc
gagggctcccccacgtacgggcacacctacacccaccgcatcgatgcggccacggccgtg
ttcgtgccgcggggcgtggccaatggcttccaggctctggaggacaacaccacctacacc
tacctggtcaacgcgcattggtctccggacgcggcctatagctttgtgaacctcgacatg
attgactggccgctcgagcccaccgaggtttccgaaaaggataagcaccacccacagctg
gcggacgccgtgccggtgccgccgcgtaagatcctggtaacgggcgcaaacggtcagctt
gggcgcgcactcaaggcggtctacggcgacgcggcgcacgtggaatactgcacgcgcgcg
gaattcgatatcaccaacccgccggcgcgggactgggcccagtaccaggcgatcatcaat
tgtgcggcgttcaacgatgttaacggcgccgaggagcgccgggccgaggcgtgggccgtc
aacgcttccgccccggcgaagctcgccacgatcgcctccgagcacaacctcacgctcgtg
cacgtcagctccgattacatctttgacggcacccgcgagctgcacaccgaggaggaaatc
ccgtccccgctaagcctttacggtgcgtccaaggcggccggcgacacggccgcgcagacc
acgcccaagcactatgtcatccgcaccgcctgggtcttcggcgagggcaagaacttcatc
cgcaccatggcggacctggccgccaaggacgtggagccgcgggtcatccacgaccagcgc
gggcgccccacctacgccgaggatctggccaaggccatcaaacacctcctcgagaccggt
gcggagtacggggtatacaacgtgacctcgggcggtgacgcggtggggcgcgatgagata
gcgatggcggcgtttattgccgtcgggaaagatcccgcgggcgtgcaccccgtgaccacg
cagcagtatcgcgagattgccgggcccgaggcggaccgcccggcggaatccacactggac
ctttcgaagatcgaggccaccggatttaccccaatgaactggcgcgccgccgtggcgctg
tacttggcattaggctag
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