Corynebacterium epidermidicanis: CEPID_07290
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Entry
CEPID_07290 CDS
T03955
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
cei
Corynebacterium epidermidicanis
Brite
KEGG Orthology (KO) [BR:
cei00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CEPID_07290 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cei03021
]
CEPID_07290 (rpoD)
Transcription machinery [BR:
cei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CEPID_07290 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AKK03309
UniProt:
A0A0G3GQ82
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All DBs
Position
1505005..1506594
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AA seq
529 aa
AA seq
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MAATDSPDQAQPEGAVETKTVKKTAVKKVAKKAVRKASPRVAKSAADTGVSTTPDTAVPV
AADLSAVAAEPAASSDDSATETPIKRAAKKTAKKVAKKTAKKAAKKAAKKTAKKTAKKAS
AGAVAAQSELPEDEIAESVDDGLDDEFSAEHDDLDTDFPLGIDEDDELDEDELDGDVTDD
EDGLAETDDDEEDDGSSVWDEDESAALRQARKDAELSASADSVRAYLKQIGKVALLNAEQ
EVSLAKRIEAGLYATHKMEELEEAFAAGDKDAKLTPAVKRDLRAIARDGRKAKNHLLEAN
LRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAM
ADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPQELAKEMDITEEKVLEIQQYARE
PISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQDVLQTLSEREAGVVKLRF
GLTDGMPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccactgactctcctgatcaggcacaacctgaaggtgccgtcgagactaagact
gtgaagaagaccgcagtcaaaaaggtagctaagaaagctgtccgcaaggcaagccctcgg
gtagctaagtccgctgcagacactggcgtgagcaccacgccagacaccgcagtacctgtt
gctgccgatctcagcgcagtggctgcggaaccagctgcgtcctccgacgactccgccacc
gaaactcctatcaagcgggctgccaagaagaccgcgaagaaggtagccaagaagaccgct
aagaaagctgcgaagaaggccgccaagaagaccgccaagaagaccgccaaaaaggcgtct
gctggtgcagttgctgcgcagtccgagctcccagaggatgagatcgcggagtccgtcgat
gatggactcgatgacgaattcagcgccgagcatgacgaccttgacacggacttcccactc
ggcatcgatgaagacgacgagctcgacgaagacgaactcgacggcgatgtcactgatgac
gaagatggcctcgccgaaaccgacgacgatgaagaagacgacggttcctccgtatgggac
gaagacgaatccgcagcgctgcgccaagcccgcaaggacgccgagctttccgcttccgcc
gactccgtccgcgcgtacctcaagcagatcggtaaggtcgcgctgctgaatgctgagcag
gaggtctcccttgccaagcgtatcgaggccggcctatacgccacccacaagatggaagag
cttgaggaagcattcgccgccggagacaaggacgcgaagctcacccccgctgtcaagcgt
gacctgcgcgcaattgctcgcgacggccgcaaggccaagaaccaccttctggaagcaaac
ttgcgcctggtggtttctctggccaagcgctacaccggacgtggcatggccttcctggac
ctgatccaggaaggtaacctcggtctgattcgcgccgtggagaagttcgactacaccaag
ggttacaagttctctacctatgccacctggtggatccggcaggcgattactcgtgcgatg
gccgaccaagcccgcactatccgtattccggtccacatggtggaagtgatcaacaagctt
ggtcgcatccagcgcgaactgctgcaggatcttggtcgcgagccgacgccacaggagctc
gcgaaggaaatggacatcaccgaggaaaaggtcttggaaatccagcaatacgcccgggag
ccaatctctctggaccagaccatcggcgacgaaggcgactcccagctcggtgacttcatc
gaagactccgaagccgtggtcgctgtggacgcggtctccttcactctcctccaggaccag
ctccaagatgtgctgcaaacgctgtccgagcgcgaggccggcgtggtgaagctccgcttc
gggcttaccgacggcatgccgcgcactttagacgagatcggccaagtctacggtgtcacc
cgtgagcgcattcgccagatcgagtcgaagacaatgtcgaagctgcgccacccttcgcgt
tcccaggtattgcgcgactacctcgattaa
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