Caenorhabditis elegans (nematode): CELE_AC7.2
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Entry
CELE_AC7.2 CDS
T00019
Symbol
soc-2
Name
(RefSeq) Leucine-rich repeat protein soc-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
cel
Caenorhabditis elegans (nematode)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
DUF1118
Motif
Other DBs
NCBI-GeneID:
177286
NCBI-ProteinID:
NP_001293758
WormBase:
WBGene00004929
Ensembl:
WBGene00004929
UniProt:
V6CJ50
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All DBs
Position
IV:complement(<5127041..>5152491)
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AA seq
631 aa
AA seq
DB search
MSVTSFFRRFSIDVDNVGGSSSTSAPGSASSSGPTKRRGRIAASIDSARRRLSLQHGAGG
QDPVHLQSIALRGRGKSENGSLPDLIEKRETPPTTANTGVSATKRVSVIATDRDRAYFLR
QKNMRNNKGHAEKDLLKEFHKCKEAQDQRLDLSSIEITSIPSPIKELTQLTELFLYKNKL
TCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLE
TLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPE
EIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVE
SNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIF
SKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNN
QLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCS
LQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQ
IPPEITAGGPSLVIQYLKMQGPYRGVVMNSQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgacgtcattcttccgtcggttttcaatcgacgttgacaatgttggcggctct
tcttccacatctgcacctggctcggcgagcagcagtggaccaacgaaacgtcgtggaagg
atagctgcttcaattgattcagctcgacgacgattgtctttacaacatggagcaggtggt
caggatcctgtacatttgcaatccatcgcgttacgtggcagaggaaaaagtgaaaatgga
agtttgcccgatttgattgagaaacgggaaacacctccaactacagcaaatacgggagta
tcggcgacgaagcgtgtttccgtgattgccactgacagagatagagcctattttttgagg
cagaagaatatgaggaacaataagggccacgctgaaaaggacctcctaaaagaatttcac
aaatgcaaagaggcgcaggatcagagattagatttgagctcaatcgagatcacgagcatt
ccgtcgccgatcaaagagctcacacagctgacagaattgttcttgtacaagaacaagttg
acgtgcttgccaacggaaataggtcaactggtgaatctcaagaaacttggtctctctgaa
aatgcgcttacatctcttccggattcacttgcttctctggaatcactggaaacattggat
ttacggcacaacaagttgacagaggttccatcggtcatttacaaaatcgggtcgctcgaa
acattatggctgaggtacaatcgaattgtggcagttgacgaacaaattggaaatctgtca
aaattgaaaatgttggatgttcgtgagaataagattcgagagttaccatctgcaattgga
aaactgacgtcactggttgtgtgtcttgtctcttataatcatttaacacgggttcctgaa
gaaatcggtgactgccattccctgactcaactcgatcttcaacacaacgacctctcagaa
ctaccgtactcaataggaaaactcgtgaatcttgttcgaatcggaattcgatacaataag
attcgatgtattccaagtgaattggaaagttgtcagcagctcgaggaatttattgtagag
agcaatcatttgcaattactaccgccaaacctgctcacaatgcttccaaaaatccacaca
gtgaatctctcacggaacgagttgactgcattcccggcaggcggacctcaacaatttgtg
tccacagtcacaattaatatggaacacaatcagatttcaaagattccaatcggaatattc
tcgaaagcaacacgattaacaaaactgaatttgaaggaaaatgagctggtctcgttgcct
ttggacatgggatcttggacatcaatcaccgagctcaatctctccacaaatcaattgaaa
gttttgccagaagatatcgaaaaacttgtgaatctggaaatccttgtgctgtccaacaat
caactgaaaaagcttccaaatcaaataggaaatctcaataaactccgcgagctggatctc
gaggaaaatgaattggagaccgttccaactgaaatcggatttttacaacatcttacgaaa
ctgtgggttcagtcaaacaagattttgactctaccaagatccattggaaatttgtgttcg
cttcaagatttgcgattgggagagaacaatttgacagcgattcccgaggaaattggccac
ctcgactcattgaaatctctatacctcaacgacaactcctctcttcacaatttgccattt
gagttggcactgtgccaatcgcttgaaataatgtcaatcgaaaactctccactttctcag
attccacctgaaatcactgctggtggtccttcacttgtgatacaatatcttaaaatgcaa
ggtccctatcgaggagttgtgatgaattctcaataa
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