Caenorhabditis elegans (nematode): CELE_F32H2.4
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Entry
CELE_F32H2.4 CDS
T00019
Symbol
thoc-3
Name
(RefSeq) WD_REPEATS_REGION domain-containing protein
KO
K12880
THO complex subunit 3
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03013
Nucleocytoplasmic transport
cel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CELE_F32H2.4 (thoc-3)
09122 Translation
03013 Nucleocytoplasmic transport
CELE_F32H2.4 (thoc-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_F32H2.4 (thoc-3)
03041 Spliceosome [BR:
cel03041
]
CELE_F32H2.4 (thoc-3)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CELE_F32H2.4 (thoc-3)
Spliceosome [BR:
cel03041
]
Complex C
Other components
EJC/TREX
CELE_F32H2.4 (thoc-3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CELE_F32H2.4 (thoc-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
PROPPIN
Motif
Other DBs
NCBI-GeneID:
172713
NCBI-ProteinID:
NP_492416
WormBase:
WBGene00009341
Ensembl:
WBGene00009341
UniProt:
P91867
LinkDB
All DBs
Position
I:<8971139..8973037
Genome browser
AA seq
331 aa
AA seq
DB search
MTVSSRERRCARLLTAADASTYFEKYKRIRSTDMKVQQCQSIAFNCDGTKLVCGAFDKKV
SVANVDGGRLRFSWVGSSHSSSVEQVACSEKQPNLFASASADRNICVWDIRQSKPTHRIS
NRVGNFFISWSPCDEYFIFLDKDNRINTVDIRNYQVVNSYEMKTFSHELTFHPLSNHVFV
AESGGKVEILKFAGGALEPVTSIQAHSHQVECLAVSISKDGRKLAVGASDASCSLWDLEE
LICERVIPRHDYGIRAVSFSCNGQLLASGSEDHSIDIAYVPDGSRCHEIKHTGETYSVAW
HPNSLLLAYTASDSMDNREAAHVKTFGHSTV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgtcttcccgagaacgacgatgtgcacgtctgttaacggcagctgatgcttcg
acatattttgaaaagtacaaaagaatcagatcaaccgatatgaaggtccagcaatgccaa
tcaatagcatttaattgtgatggaacaaaacttgtatgtggtgcattcgacaaaaaagtg
agcgttgcaaatgtggatggaggtcgtctcagattttcttgggtgggctctagtcattca
tcgtctgtggaacaggtagcatgtagtgaaaagcagccaaacttatttgcatcagccagt
gcagatagaaacatttgtgtatgggacattcgacaaagcaaaccgactcatcgaatttca
aatcgagttggaaatttcttcatctcctggtctccgtgtgacgaatatttcatatttctc
gacaaagataatcggataaatacagtagacattcggaattatcaagttgtaaattcctat
gaaatgaaaactttctcccacgagctaacatttcaccctttgtcgaaccacgtattcgta
gcagagtctggaggaaaagttgaaattctaaagttcgccggtggagcccttgaacctgtg
acttcgattcaagcccattcgcatcaagttgagtgtctggcagtgtcgatctcgaaagac
gggcgaaaattggcagttggagcatcggatgcttcttgctcactttgggatcttgaagaa
ctcatttgtgaaagagttattcctagacacgactacggaataagagctgtatcattttct
tgtaatggtcaacttcttgcatctggatccgaagatcactcaatcgatattgcctatgta
ccagacggatcacgttgccacgaaattaaacacactggcgagacctattcagttgcctgg
catccgaactctcttctccttgcatacactgcttccgatagtatggacaatagggaagca
gcacatgttaaaacgtttggacacagtaccgtgtaa
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integrated database retrieval system
