Caenorhabditis elegans (nematode): CELE_K02F2.3
Help
Entry
CELE_K02F2.3 CDS
T00019
Symbol
teg-4
Name
(RefSeq) Splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CELE_K02F2.3 (teg-4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_K02F2.3 (teg-4)
03041 Spliceosome [BR:
cel03041
]
CELE_K02F2.3 (teg-4)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_K02F2.3 (teg-4)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CELE_K02F2.3 (teg-4)
Spliceosome [BR:
cel03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
CELE_K02F2.3 (teg-4)
Complex B
CELE_K02F2.3 (teg-4)
Complex C
U2 SnRNP specific factors
CELE_K02F2.3 (teg-4)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
CELE_K02F2.3 (teg-4)
TFTC complex
CELE_K02F2.3 (teg-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
172406
NCBI-ProteinID:
NP_491953
WormBase:
WBGene00019323
Ensembl:
WBGene00019323
UniProt:
O44985
LinkDB
All DBs
Position
I:6814511..6834699
Genome browser
AA seq
1220 aa
AA seq
DB search
MHLYNLTLQGQSAINQAIQGNFSGTPKAQEIVVGRGSALELLTLDTVTGKIKVMCHQDIF
GIVRSLLAFRLTAGTRDFIAVGSDSGRIVILQYNAEKTCFERLHQETFGKTGCRRIVPGH
FLVGDPRGRALMIGAVERQKLVYIMNRDSEAHLTISSPLEAHKHHTLCYAMVGIDVGFEN
PTFACLEFDYEDADNDPTGEAAKRTQQTLTFYELDLGLNHVVRKYAEPLNDPGNLLIAVP
GGNDGPSGVIVCCENYLVYKNLGDQPDIRCPIPRRRNELDDADRTMLIIATATHKTKNMY
FFLVQAENGDIFKVTLETDEDLVSEMKLKYFDTVPPANALCILKSGFLFVAAEFGNHELY
QIASLGEGDDDEFSSAMGFGENDAAFFEPHELKSLIPIDSMDSLSPLTDAVIGDIAREDA
AQIYSLVGRGARSSLKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYIVVSFVN
ATLALTIGDTVEEASDSGFLPTTPTIGCAMIGDDSLVQIYSEGIRHIRADKRINEWKAPP
RRQIVKCAVNRRQVAVALTGGELVYFELDLNGTLNEFTERKLFNADIACMTFSEISEGEL
NSRFLALGTVDNAVRIISLDPNDMLMPLSTQSLPCPPESILLIDTPNEDGKGVAAVHLNI
GLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQCQGRSAILCTSSRSWLLYHFQR
RFHLTPLSYANLEYAASFCSNQCSEGIVAISASTLRIIAAEKLGVAFNVQSFEHKMTPRR
VAVHPSMPCLIVIETDHASYTEVTKNIKRNQMAADVEAMASDETEAQLAQEIATNLRERR
LDERVYGAPRAARGKWASAISLISATSGDKLSYFELPQDENAKCVALVQFSKHPNEAMVL
VGCGVNEVLNVHDIDPNDTSIRPTRGCVYTFHLSANGDRFDFLHRTETPLPVGAIHDFRG
MALVGFGRFLRMYDIGQKKLLAKCENKNFPVSIVNIQSTGQRIIVSDSQESVHFLRYRKG
DNQLVVFADDTTPRYVTCVCVLDYHTVAVADKFGNLAVVRLPERVNEDVQDDPTVSKSVW
DRGWLNGASQKVELVSNFFIGDTITSLQKTSLMPGANEALVYTTIGGAIGCLVSFMSKDE
VDFFTNLEMHVRSEYPPLCGRDHLAYRSYYAPCKSVIDGDICEQFSLMDTQKQKDVAEEL
GKTVSEISKKLEDIRTRYAF
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgtacaatttgacactacaagggcaatcggccatcaatcaggccattcagggc
aatttctctggaacccccaaggcgcaggaaatcgttgttgggcgcggatcagcactggag
ttgctcacactggatacagttacaggcaaaataaaagttatgtgccaccaggacattttc
ggaatagttcgatcgcttctcgctttccgtttgacagctggaactcgagatttcatcgca
gttggttcagactcgggtagaattgtgattttacaatataacgctgaaaaaacatgtttc
gagcggctgcatcaggaaactttcggaaaaactggatgccgtcgaatcgttccaggccat
ttcttggttggagacccacgtggacgtgcattaatgattggagccgttgaacgtcaaaag
cttgtttatattatgaatcgagactctgaagcacatttaacaatttcatcgccacttgaa
gctcacaagcatcacacattgtgttatgcaatggttggaatcgatgtgggatttgagaat
cctacttttgcgtgtctggaatttgattatgaggatgctgacaacgatccaaccggagaa
gcagcaaaacgaacacaacaaacgttaaccttctacgagcttgatttgggattaaatcat
gttgttcgaaagtatgcggaacctctaaatgatccaggaaacttgcttatcgcagttcca
ggtggtaatgacggtccgtctggtgtcatcgtgtgctgtgaaaactatttggtgtacaag
aatcttggtgatcaaccagatattagatgtccgattccaagaagaagaaacgagctcgat
gacgcagaccgaacaatgctcatcattgcgacggctactcataaaacgaaaaatatgtac
tttttccttgttcaagctgaaaatggagatattttcaaagtaacactggaaactgatgag
gatcttgtgtcggagatgaaactcaaatattttgatactgtaccgcctgcgaacgcttta
tgtattctgaaatccggattcttgttcgtggctgcagagttcggaaatcatgagctctac
caaatcgctagtctgggtgaaggagatgatgacgaattttcatcagcaatgggattcgga
gaaaacgatgcggcattctttgagccacatgagctcaaatctttgattccaattgattca
atggatagtttgagccctcttacagatgctgtcattggagatattgctcgagaagatgca
gcacagatttactcactcgttggacgtggtgctcgatcttctttgaaagttcttcgaaat
ggacttgaaatttctgaaatggcagtttctgatttgcctggaaatccgaatgctgtgtgg
actgtgaagaagaatatcgaagaccaatatgactcatatattgttgtttcctttgtcaat
gccacacttgcactaacaattggagatactgtcgaagaagcatcagattcaggatttctt
ccaactacaccaactattggatgtgcaatgattggtgatgattctcttgttcagatctac
tcggaaggtattcgtcatattcgggcagataagcgtatcaatgaatggaaggcaccacca
cggcgacaaattgtcaagtgtgctgttaatcgacgacaagttgcagttgcattgacagga
ggagaacttgtgtatttcgaattagatttgaatggaacattgaacgagttcacggaacga
aaactattcaacgcagatattgcatgcatgacgttcagtgagatttcagaaggagaactc
aattctcgttttttggcactcggaacagttgataacgctgttagaataatttctctcgat
ccaaatgatatgcttatgccattgagtactcaaagtcttccatgtccaccagaatctatt
cttcttattgatacaccgaatgaagatggaaaaggagttgcagctgttcatttgaatatt
ggtttgcagaatggatgcctcttccgtaatactgtcgataatgtcactggagctattatg
gataccagaacacgatatcttggtaccagacctgtaaaacttttcaaagtacaatgtcag
ggacgatctgcgattctctgtacatcttcccgttcatggcttctctatcacttccaacgc
cgctttcatttgacaccactcagctatgcgaatttggaatacgcggcaagcttctgctca
aatcagtgctcagaaggaattgtcgccatttctgccagtacactcagaattattgcagcc
gagaagcttggagtggcatttaatgttcaatcatttgaacataagatgacaccacgtcgt
gttgctgttcatccatcaatgccatgtctaattgtgattgaaactgatcatgcgtcttat
acagaagttaccaaaaatattaagagaaatcaaatggctgcggacgttgaagcaatggca
tcagacgagacagaagctcaacttgcacaagaaattgctacaaatcttcgtgaacgacga
ctcgatgagcgagtgtacggagcaccacgagcagctcgaggaaaatgggcatctgctatc
agtttaatttctgcgacttctggggataaactctcatattttgagctcccacaagatgag
aatgcaaaatgcgtggctcttgtgcaattctcgaagcatccgaatgaagctatggtgctg
gttggttgtggagttaatgaagttcttaatgtacatgacattgatccaaatgatacatcc
attcggccaactagaggatgtgtttatacattccatctatcagcaaatggtgatcgattc
gactttttgcacagaacggaaacaccattgccagtgggagcaattcatgatttccgtggc
atggcactcgtcggttttggtcgattcctccgaatgtacgacattggacagaaaaagtta
ttggcaaagtgcgaaaacaagaatttcccagtttcaattgtcaatattcaatcaacagga
caacgaatcatcgtctcggatagccaagaatctgttcactttttaagatatcggaaagga
gataatcaattggttgtattcgctgatgacacaactccccgttacgtgacatgtgtttgt
gttcttgattatcatactgtagctgttgctgataagttcggaaatttggcagttgttcgt
cttccggaaagagttaatgaagatgtacaggatgatccaactgtatcgaagagtgtttgg
gatcgtggatggcttaatggagcttcacaaaaggtcgaacttgtttcgaatttcttcatc
ggtgacacgattacaagccttcagaagacgtcattaatgcctggagcaaatgaagcatta
gtatatacaacaattggtggagctattggatgtttggtttcgttcatgtcaaaagatgaa
gtcgactttttcacaaatctggaaatgcatgttcgcagtgaatatccgccattgtgtggc
cgtgatcatcttgcttatagaagttactacgcaccatgcaagagtgtaatcgatggtgat
atttgcgagcagttcagcttgatggatacacagaaacagaaggatgttgctgaagaattg
ggaaaaactgtcagcgagatctcaaagaagttggaagacattcgcactcgctacgccttt
taa
DBGET
integrated database retrieval system
