Caenorhabditis elegans (nematode): CELE_T27F2.1
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Entry
CELE_T27F2.1 CDS
T00019
Symbol
skp-1
Name
(RefSeq) mammalian SKIP (Ski interacting protein) homolog
KO
K06063
SNW domain-containing protein 1
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03040
Spliceosome
cel04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CELE_T27F2.1 (skp-1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
CELE_T27F2.1 (skp-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_T27F2.1 (skp-1)
Spliceosome [BR:
cel03041
]
Complex B
Other components
Prp19-related factors
CELE_T27F2.1 (skp-1)
Complex C
CELE_T27F2.1 (skp-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
179598
NCBI-ProteinID:
NP_505950
WormBase:
WBGene00004806
Ensembl:
WBGene00004806
UniProt:
Q22836
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All DBs
Position
V:11645481..11650090
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AA seq
535 aa
AA seq
DB search
MSMKLRDILPAPVAADEAASQIRRDPWFGGRDNEPSAALVSKEPPPYGKRTSFRPRGPED
FGDGGAFPEIHVAQFPLGLGLGDMRGKPENTLALQYGTDGKLQHDAIARIGHVKDKVVYS
KLNDMKAKTWNEDDDDIQKPDDDAVIDATEKTRMALEKIVNSKVASALPVRHADKLAPAQ
YIRYTPSQQNGAAGSQQRIIRMVEEQKDPMEPPKFKINQKIPRAPPSPPAPVMHSPPRKM
TAKDQNDWKIPPCISNWKNPKGFTVGLDKRLAADGRGLQQTHINENFAKLADALYIADRK
AREEVETRAQLERRVAQNKKSEQEAKMAEAAAKARQERSAMRRKDDEDDEQVKVREEIRR
DRLDDIRKERNIARSRPDKADKLRKERERDISEKIVLGLPDTNQKRTGEPQFDQRLFDKT
QGLDSGAMDDDTYNPYDAAWRGGDSVQQHVYRPSKNLDNDVYGGDLDKIIEQKNRFVADK
GFSGAEGSSRGSGPVQFEKDQDVFGLSSLFEHTKEKKRGGDGGDSRGESKRSRRD
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaaactacgagatatccttcctgctcctgtggcggcagacgaagcagcttca
cagattcgacgagatccttggtttggtgggcgcgataacgaaccatccgccgcactcgta
tcgaaggaaccaccgccgtacggaaaacggaccagttttcgaccaagagggcctgaagat
tttggcgatggcggagcgttccctgaaattcacgttgctcagtttcctctcggattaggt
cttggagatatgagaggaaagccagaaaatacgctcgccttgcaatatggaactgatgga
aagttacaacacgatgctattgctcgtatcggacatgttaaggataaagttgtctactcc
aagcttaatgatatgaaagccaagacgtggaacgaggatgatgatgatattcagaaacca
gacgatgacgctgttatcgatgctacggagaagacaagaatggctttggaaaaaatcgta
aattcaaaagtagcctcagcacttcctgttcgtcatgccgacaagttagcacctgctcaa
tatatcagatacactccaagtcagcagaatggagctgctggatcacaacagcgcatcatc
agaatggttgaagaacaaaaagatccgatggaaccaccaaagttcaaaatcaatcagaag
attcctagagcaccaccatctccaccggcaccagtcatgcattctcctccaagaaaaatg
acagctaaagatcaaaacgattggaagattccaccatgtatttcaaattggaaaaatcca
aaaggattcacagttgggttggacaaacgattggctgctgatggacgtggtctccaacag
actcatattaatgaaaactttgcgaagcttgctgatgctttgtacattgctgatagaaaa
gctcgtgaagaggttgagacacgtgctcagcttgaaagacgcgttgctcaaaataagaag
tctgagcaagaggctaaaatggcagaagccgcagcaaaagcccgccaggaaagatcagcg
atgcggagaaaggacgatgaagatgatgaacaagtcaaagttcgcgaagaaattcgacgt
gatcgtctcgacgatatcaggaaagaaagaaatattgctcgttcacgaccagataaagct
gacaagcttcgcaaagagcgtgaaagagatatttcggagaaaattgtgcttggtttgccg
gacacgaatcagaaacgaactggcgaaccacagttcgatcaaagattgtttgataaaacc
cagggactcgacagtggagcaatggacgatgatacttacaatccttatgatgctgcgtgg
cgtggcggtgacagtgttcaacagcacgtttatcgaccgagcaaaaatctcgacaacgat
gtttatggtggcgatttggacaagatcatcgaacagaagaatcggtttgtagctgataaa
ggattttcaggagcagagggctcgagtcgtggatctggacctgttcagttcgagaaggat
caagatgttttcggattgtcatcacttttcgagcacaccaaagaaaagaaacgaggtggg
gatggtggagactcccgtggagaatcaaagaggtctcgacgcgactaa
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