Caenorhabditis elegans (nematode): CELE_Y39D8C.1
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Entry
CELE_Y39D8C.1 CDS
T00019
Symbol
abt-4
Name
(RefSeq) ABC transporter domain-containing protein
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CELE_Y39D8C.1 (abt-4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cel02000
]
CELE_Y39D8C.1 (abt-4)
Transporters [BR:
cel02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
CELE_Y39D8C.1 (abt-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
DUF4162
AAA_23
ABC2_membrane
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
178559
NCBI-ProteinID:
NP_503175
WormBase:
WBGene00000022
Ensembl:
WBGene00000022
UniProt:
Q9TXV8
LinkDB
All DBs
Position
V:complement(323777..330725)
Genome browser
AA seq
1802 aa
AA seq
DB search
MGALGQLRLLLWKNWLQQLRSPWFALFELVVPLILIGASFGLLIGFSGQFETTYTERKYA
AWPVSGSAYDLIMPTDPDDPIKSAIVEPYFLFNSQLTCQFLNTYTIGVNKYRMDIIFAYA
PMTDATKQIMDKIQNRYTANDLLNPVAAYIKGLYNITAVPVLNTNMTYKGFTTEGEMVSW
MQGQFQSECDNPLLAGIVFDDSIAKDLKNPDKRDFTYTIRLSNTHRRSRNAFGDNSYPWD
TSVSFAVQYVSGPINPDDNDGGSPGYWQEGFMTVQRAVDVAITEIITGEDAQLTPLLDSY
QVSRFPFPGYSTKIIEIGAFFMPVIVIFSFMTSVIYIVRAVVVEKEDRLKEYMRVMGLSQ
FINWVAHFIINYAKLTFAVIVLTILMHFVALKSDMTLMFVFLMIYAFDVVYFAFMISSFM
NSATSATLISVVFWMLLYFWYAFFSSIDQTNPYPLGYRLINCINPDIALNYGLQLLAAYE
TQADGLKWGELFTPPSPDNNLTFGHALIALIVDGIIMIILTWYIEAVIPGGEGVPQKPWF
FVLPSYWFPNSGSKTVDSSDQFQQIQYADHVKLEKEPTDLIPTINVVNLTKTYGTSFFKK
LFDCKFGKSGEKRAVSNLNLKMYPGQCTVLLGHNGAGKSTTFSMLTGVASPSSGSAYVND
FDIRTSLPKIRREMGLCPQYNTLFGFMTVMEHLEFFAKLKERTWDPEEAREILARLRIDF
KADFMAGALSGGQKRKLSLAIALIGGSEVVMLDEPTSGMDPGARHETWTLIQREKERRTI
LLTTHFMEEADLLGDRIAIMAHGQLECCGSPMFLKQQYGDGYHLTIVYDTTSTPDVSKTT
DIIREYIPEAHVFSYIGQEATYLLSATHRPIFPKLFKELEDHQTQCGITSFGVSITTMEE
VFLKVGHTADERYNYEHGIENDISEMIEKDDPILQDLRAQVRVTGFTLQMQHAKAMFYKR
AIFFFRKWTQFLPQLVFPVAYLVLMVFTSQVLPSVKEQDPQTISLAPFSDTKKAGHLVSD
SGNYVTLLGGSQNLSSMVQGTVTQLGVTQTVVDITSNVEKFIMDQTNAMGSRTFGLHYAL
GFVPSMFNFSTVSVPSLKTFFNNFGLYTPALAITFTDSMILSQKQKKQYSFTAVNHPLPP
STQDTLKNTNRSDGAAFLIAYGLIVSFAVCVAGYSQFLITERKKKSKHMQLLSGIRPWMF
WLTAFIWDAAWFVIRILCFDAIFYIFNITAYTHDFGVMLILTLSFLLYGWTALPFTYWFQ
FFFESAPKGFMMVTMYHILTGMIGSIAVPIISQTSSLDAGYLWSIIFAWLFPTYNISQIA
TVTFQNENVRIACKKLDCTIPMFKAVTACCGTASERLYVDNVLFVGNRKGILVYVIFLAV
QGFIYWIWVFMRENDQFTKLFALIRCRKADNPIWDITDTDKVDERDVEDSDVIAEKSVVQ
RLANNNKTALVSNNLVKWYGNFNAVKGVNFHVNSKDCFGLLGVNGAGKTSTFQMLTGENS
ISSGDAYVNGWSVKNNWREAGANTGYCPQYDAIIKEMSGEETLYMFARIRGIPEKDIPKK
VNAVIHAIGIGMYASRQIKTYSGGNKRRLSLGIAIVGLPDVLLLDEPTSGVDPKARRIIW
NILNRLRDLGTALVLTSHSMDECEALCTELAIMVYGKFRCYGSCQHIKSRYGSGYTLLIR
LKNRNDAEKTKSTIKQTFRGSVIKEEHVLQLNFDIPRDGDSWSRLFEKLETVSTSLNWDD
YSLSQTTLEQVFIEFSRDAGVSSDSEFDGASSTGSANSRGKQNGYTNRALTIESDAESAM
YF
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcattgggccaactccggctcctgctctggaaaaactggctccagcagctcaga
tcaccgtggtttgctcttttcgagctcgtcgttcccctcattctcatcggagccagtttt
gggcttttgattggtttctccggacaattcgagacaacgtacacagagcgtaaatatgcg
gcgtggccagtctccggcagtgcctacgatctcataatgcccacggatcccgatgacccc
ataaaatctgcaatcgttgaaccatattttctgtttaattcgcagctcacttgtcaattt
ttgaatacttatacgataggagttaacaagtatcgaatggacattatcttcgcctatgca
ccaatgacagatgccactaaacaaatcatggacaaaatccaaaatcgttacacagcgaat
gatctactcaatcctgtcgcggcatacataaagggactctacaatatcacagcagtacca
gttttgaacacgaatatgacatacaaagggttcacaaccgaaggcgaaatggtttcctgg
atgcagggacagtttcagagtgaatgtgacaatccgcttttggctggtattgtgttcgac
gactccatcgcaaaagatctcaagaaccccgacaaacgagatttcacctacacaatccga
ctctcaaatactcaccgaagatccagaaacgccttcggtgacaactcctacccatgggat
acctctgtctcatttgctgttcagtatgtcagcggtcccatcaacccggatgacaatgac
ggaggttcccccggatactggcaggagggtttcatgactgtccaaagagctgtcgacgtg
gcgatcaccgagattatcactggggaggatgctcagctcaccccgcttctcgattcctac
caagtatcgagattcccgtttcccgggtattccacgaagattattgagatcggagcgttc
ttcatgcctgtcattgtgattttctccttcatgaccagcgtcatttacatcgtaagggcg
gttgttgtggagaaggaggatcggctgaaagagtacatgagagtcatgggactatcccag
tttatcaactgggttgctcattttatcatcaactacgccaagctcacttttgcagttatt
gtgttaacgattctcatgcacttcgtcgctttgaaatccgacatgacactaatgttcgtc
ttcctgatgatctacgccttcgatgttgtctacttcgcctttatgatctcctcattcatg
aactccgccacatcggccacccttatctctgtcgtcttctggatgttgctctacttctgg
tacgcattcttctcctccatcgatcaaacgaatccgtacccattgggctaccgacttatt
aattgcatcaacccggatattgcgttaaactacgggcttcaactgctagctgcctacgag
acacaggcggatgggctcaagtggggagagctttttacaccgccaagccctgataacaac
ttgacgtttggacatgctttgatcgcacttatcgtcgatggaattatcatgattattttg
acatggtacattgaagcagtgattccaggaggagaaggagtgcctcaaaaaccatggttc
tttgtcctgccatcctactggttcccgaatagcggctccaagactgtggactcttctgat
cagttccaacaaatacaatacgcggatcatgtgaagctcgagaaagagcccaccgatctc
ataccaactattaatgtggtcaacctaacgaaaacttatggtacatcgtttttcaagaaa
ctctttgactgtaaatttggaaaatctggagaaaaacgagccgttagcaatttgaacctg
aaaatgtacccgggtcaatgtacagtactacttgggcacaatggagccggaaagtcgact
acgttcagtatgcttaccggagtagcctcgcctagctcgggttcggcgtacgttaatgat
tttgacattagaacttcgctgccaaagatccgccgtgaaatgggactctgtccgcaatac
aacacacttttcggattcatgacggtcatggagcatctcgagtttttcgcaaagctgaag
gagaggacatgggatcccgaagaggctcgtgagattctggctcgactgagaatcgacttc
aaggctgatttcatggcgggcgccttgtctggtggacagaagcggaagctatcattagct
attgccttgattggaggctcagaggttgtgatgctcgacgagccgacatctggcatggat
cctggagctagacacgagacatggacactgattcaacgagagaaggaacggagaaccatt
ttgttgactactcatttcatggaggaagctgacttgttaggggacagaattgcaattatg
gctcacggtcagctggaatgctgtggctccccaatgttcctcaaacagcaatatggagac
gggtaccatttgacaattgtttatgacaccacttctactccagacgtctcgaagaccacg
gacatcattagagaatatattccagaagcccacgtcttctcctacattggtcaagaagcc
acgtatcttctgtcggccacgcaccgcccgattttcccaaaattgtttaaagaacttgaa
gatcatcagacacaatgtggaatcaccagttttggagtttccatcaccactatggaggag
gtgttcctgaaagttggacacacggcagatgagcgctacaattatgagcatggcattgaa
aatgatatcagtgagatgattgagaaagatgatccgattttacaagacctccgcgcccag
gtccgcgtaacaggcttcactcttcaaatgcagcacgccaaggcgatgttctacaagcga
gccatctttttcttccgtaaatggactcaatttttgccacagctggtgttcccggttgct
tacttggttcttatggtgttcacgtctcaagtgctcccttctgtcaaagaacaggatcca
cagacaatttcattggctccattctccgacacgaaaaaagcgggtcaccttgtcagtgac
tctgggaactatgtcacgcttcttggaggctcgcaaaatttgtccagcatggttcaaggc
accgtgacacagcttggtgtcactcaaacagtggtcgatataactagcaacgttgagaaa
ttcattatggatcagacaaatgctatgggttcccggacattcgggcttcattatgcactt
ggttttgtaccgtctatgttcaatttcagtactgtatccgttccatctcttaaaacattc
ttcaacaatttcggtttatacacaccagcgctagcaattactttcacggattctatgatt
ttgtcgcaaaagcagaagaagcagtattcgtttacggctgtgaatcaccctctcccacca
tccacccaagacacgttgaagaatacgaatagaagtgacggagccgcatttttgattgct
tatggattgattgtatccttcgctgtctgcgttgctggatattcccaattcctgattacc
gaacgcaagaagaaatccaagcacatgcagctgctctcaggaatccgtccttggatgttc
tggctgactgcgttcatctgggacgccgcgtggtttgtcattcggatcctttgcttcgac
gccatcttctacatcttcaacatcaccgcctacacccatgactttggtgtcatgctgatc
cttaccctctccttccttttatacggctggaccgcgctgcccttcacctattggttccag
ttcttcttcgagtccgcgccgaaaggattcatgatggtcacgatgtatcatattttgaca
ggaatgattgggtcgatcgcagttccgattatttctcaaacgtctagtctggatgctggt
tatctgtggtccatcatttttgcgtggctcttcccgacgtataacatttcgcagatcgcc
acagtgaccttccaaaacgagaacgttcgaatcgcttgcaagaaacttgactgcacgatt
ccgatgttcaaagcggtgacggcttgctgtggaactgcttcagaacgtctctacgtcgat
aacgtgctctttgttggaaatcggaaaggaattttagtctatgtgatattccttgccgtc
caaggattcatctattggatttgggtgttcatgagagaaaatgatcagttcacaaaactg
tttgcattgataagatgtagaaaagctgataacccaatttgggatatcaccgatactgat
aaagttgatgagagagatgtggaggattcggatgtaattgcggagaaatcagtggttcaa
agacttgcgaataacaacaagacggctctagtcagtaataatttggtgaaatggtacgga
aacttcaacgccgtgaaaggagtcaacttccatgtcaactccaaagactgcttcggactt
ctgggagttaacggagccggaaaaacgtccacgttccaaatgctcactggagagaactcg
attagttcaggagatgcctacgtaaatggttggagcgtgaagaacaattggagggaagcc
ggagcaaacacgggatactgcccacaatatgacgcgattatcaaggaaatgtctggagag
gagactctgtacatgttcgccagaattcgaggcataccggagaaggatattccgaaaaag
gtcaacgctgttatccacgctatcggaatcggaatgtatgccagtcgccaaatcaagacc
tactctggcggaaacaagcgccgtctctccctgggtattgccattgttggtctgcccgac
gtcctcctcctcgacgagccgacctcaggtgtggatccaaaggctagacgtattatctgg
aatattttgaatcgtttgagagacttgggtactgctcttgtcctcacttctcatagtatg
gatgaatgtgaagcgttgtgcacggaactggcgattatggtttatggaaaattccgatgc
tatggaagttgtcagcatatcaagagtagatatggaagtggatacactctgctaatccgt
ctcaagaaccgaaatgacgctgaaaagaccaagtcaacgatcaagcaaacattccgcgga
agcgtcatcaaggaggaacacgtcctccagctcaactttgacattccacgtgatggagat
tcgtggtctcgcctcttcgagaagcttgaaacagtctccacgtcgctcaactgggatgat
tactcgctgtcgcaaaccacactggagcaggtgttcatcgaattcagcagggacgccggg
gtatcttcggattcggagtttgatggagccagcagcacagggtccgccaactcgcgaggc
aaacagaatggttacacgaatcgggcactaaccattgaaagcgacgcggaaagtgccatg
tatttctaa
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integrated database retrieval system
