Cedecea neteri ND14a: LH86_11350
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Entry
LH86_11350 CDS
T03337
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cen
Cedecea neteri ND14a
Pathway
cen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LH86_11350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cen03400
]
LH86_11350
DNA repair and recombination proteins [BR:
cen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LH86_11350
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LH86_11350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
UB2H
AAA_22
THP2
AAA_30
DUF87
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AIR65654
LinkDB
All DBs
Position
2373416..2375431
Genome browser
AA seq
671 aa
AA seq
DB search
MSKAFKLNSAFKPSGDQPEAILRLKDGLENGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRAILRRLTELQ
YTRNDQAFQRGTFRVRGEVVDIFPAESDDLALRVELFDEEVERLSLFDPLTGQIDQTIQR
FTIYPKSHYVTPRERIVQAMEDIKVELAERRKFLLENNKLLEEQRITQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGEDIVDQVVRPTGLLD
PVIEVRPVATQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEENGITPQGLNKRVVDVLQLG
EGMAKTKGRVKTKARSVIEDDEVVLTPKALQQKIHQLETKMLEHAQNLEFEEAAQVRDQL
HKLREMFIAAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcgttcaaactgaattccgcatttaaaccttctggcgaccagcctgaagct
atccttcgcctgaaagacgggcttgaaaacgggctggcgcaccagacgctgctgggcgtt
acggggtcgggtaaaaccttcacggtggcaaacgtgattgctgaccttcagcgccccacg
atggtactggcgccaaataagacgctggcggcgcagctttacggtgaaatgaaagagttc
ttcccggacaatgccgttgagttttttgtctcttactacgattactaccagcctgaagct
tatgtgccaagctcggacaccttcattgaaaaagatgcgtcggtgaacgaacacattgaa
cagatgcgtctgtcggcgaccaaagcgctgcttgagcgccgggacgtcatcgtggtggca
tccgtgtcggcgatctacggtctgggtgacccggacctgtacctgaagatgatgcttcat
ctgacgaagggcatgatcatcgatcagcgggcgatcctgcgccgtctcacggagctgcaa
tacacgcgcaacgatcaggcattccagcgcggtacgttccgcgtaagaggggaggtggtc
gatatcttcccggctgaatcagacgatcttgcgcttcgcgttgaattgttcgacgaagag
gttgaaaggctgtcgctgtttgatccgctcaccgggcaaatcgatcaaactattcagcgt
tttactatctaccctaaatcgcactacgtgacgccgcgcgagcgtattgtgcaggcgatg
gaagacatcaaagttgagctggccgagcgccgaaaattcctgctggaaaataataaactg
ctggaagagcagcgtattacccagcgaacccagtttgatctcgagatgatgaacgagctg
ggttattgctcgggcattgaaaactactcgcgcttcctctccgggcgagggcctggcgaa
ccacccccgacgctttttgactatcttccggctgatggcctgctggtggtggatgaatcc
cacgtcaccattccgcaaattggcggcatgtatcgtggcgaccgagcccgtaaagaaacg
ctggtggaatacggtttccgcctgccgtcggcgctggataaccgcccgttaaaatttgaa
gagtttgaagcgctggccccgcagaccatctacgtttcagcgacgccgggcaactatgag
ctggaaaaatctggcgaggacatcgttgaccaggttgttcgccctacggggctgctcgat
ccagtgattgaagtgcgcccggtggcaacgcaggtagatgatttgctctctgaaattcgt
aaacgtgtggccatcaatgaacgcgtgctggtgacgacattaaccaagcggatggcggaa
gatctgaccgagtatttagaggagcatggcgagcgcgtgcgctacctgcactcagatatc
gacaccgtggagcgcatggagattatccgcgatttgcgtcttggtgaatttgacgtcctg
gtggggatcaacctgctgcgagaaggtcttgatatgccggaagtgtcgctggttgccatt
ctggatgcggataaagaaggttttctgcgttccgagcgctcgcttattcagaccattggc
cgtgcggcgcgtaacgttaacggcaaggcgattctctacggcgataaaatcacgccgtca
atggccaaagcgattggtgaaaccgaacgccgccgtgagaagcagcagcgctacaacgaa
gagaatggtattacgccgcagggcctgaacaaacgagtggtggacgttctgcagcttggc
gaaggcatggctaagaccaaagggcgggttaaaaccaaagcacgcagcgtgattgaagat
gatgaagttgtgctgaccccgaaagcgctgcagcagaaaattcatcagcttgaaacgaag
atgctggaacatgcgcagaatctggagtttgaagaggccgcgcaggttcgcgaccagctc
cacaagttgcgcgaaatgtttatcgccgcctcataa
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