Cardinium endosymbiont of Oedothorax gibbosus: CAOE_0012
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Entry
CAOE_0012 CDS
T08548
Symbol
rfbC
Name
(GenBank) Putative dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ceng
Cardinium endosymbiont of Oedothorax gibbosus
Pathway
ceng00521
Streptomycin biosynthesis
ceng00523
Polyketide sugar unit biosynthesis
ceng00541
O-Antigen nucleotide sugar biosynthesis
ceng01100
Metabolic pathways
ceng01110
Biosynthesis of secondary metabolites
ceng01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ceng00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CAOE_0012 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CAOE_0012 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CAOE_0012 (rfbC)
Enzymes [BR:
ceng01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CAOE_0012 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CAH2559586
UniProt:
A0A8X6EN95
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Position
1:complement(14543..15091)
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AA seq
182 aa
AA seq
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MQLEAQYLSGLLLFKPTIYYDSRGYFFESYHKEKYKAVGLDVSFIQENQSLSKKGTLRGL
HYQLAPYAQAKLVRVVQGVIWDVVVDLRKAMDTFGKWQGFLLSSENQHQLFVPRGFAHGF
IALSNEAIVAYKCDAYRYPDAEQGIHFQDPTLNIPWEDYETPQIISAKDEALPLLQEAIY
NF
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagaagcacaatacctttcaggtcttttactgtttaaacctactatatattac
gatagcagaggttatttttttgaatcttaccataaagaaaaatataaggcagtaggcttg
gatgtttcttttatacaagaaaatcaatctttatctaaaaaaggaacccttcgtgggctc
cattatcaattggcgccctatgcacaagccaaattggttcgtgtggtacagggcgttata
tgggatgtggtagtagacttgcgtaaggcaatggatacctttggaaaatggcagggcttt
ttactttcttcagaaaaccagcatcagctttttgtgcctagaggctttgcccatggcttt
atagccttaagcaacgaggctatagtcgcgtataagtgcgatgcatatcgttatccagac
gcagagcagggcattcattttcaagatcctaccttaaatattccttgggaagattatgaa
acaccccaaattatttcagcaaaagatgaggcgttaccactattgcaagaggcaatctat
aacttttaa
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