Canis lupus familiaris (dog): 477026
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Entry
477026 CDS
T01007
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cfa04040
]
477026 (SCN10A)
Ion channels [BR:
cfa04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
477026 (SCN10A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
Na_trans_cytopl
CcmD_alt
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
477026
NCBI-ProteinID:
NP_001003203
Ensembl:
ENSCAFG00000005056
VGNC:
45913
UniProt:
O46669
LinkDB
All DBs
Position
23:complement(8460551..8567500)
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AA seq
1962 aa
AA seq
DB search
MEFPFGSLETTNFRRFTPESLVEIEKRIAAKQAAKKAKGKHREQKDQEEKPRPQLDLKAC
NQPPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLDKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSWFSLFITVTILVNCVGMTQTELPDRIEYVFTVIYTFEALIKILARGFCLN
EFAYLRDPWDWLDFSVITLAYIGEATALRGISGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVKNCAALNETGNYSSYGKQEWNFC
HRDEDFYYNKPGTSDPLLCGNGSDAGHCPKGYLCLKTSDNPDFNYTSFDSFAWAFLSLFR
LMTQDSWERLYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEI
EAKEKTFQETLEMPRKEQEVLAALGIDTASLHSCNGSPLPSKNASERMRRMKPRVSEGST
DDNKSPQSDPYNQRRMSFLGLTSGRRRASHGSVFHFRTPCLDTSFPDGVTDDGVFPGDRE
SHRGSLLLGGGTSQQGPLLRSPLPQPPNPGSGHGEDGHSTLPTGELAPGGIEVSAFDAGQ
KKTFLSAEYLNEPFRAQRAMSVVSIMTSVLEELEESERRCPPCLTSFAQKYLIWECCPTW
VKLKTVLFGIVTDPFAELTTTLCIVVNTVFMAMEHHGMSSAFEAMLQIGNIVFTVFFTAE
MVFKIIAFDPYYYFQKRWNIFDCIIVTVSLIELGAARKGSLSVLRTFRLLRVFKLAKSWP
TLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGENYRDNRRNISAPNEEWPRWH
MHDFFHSFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFTALLLN
SFSADNLATPDEDGEVNNLQVALARIQAFGHRTKKAICNFFTRPCLLPWPKAEPQLVVKL
PLSSSKAENHIAANAAVGSPGGLSVSRGLRDDHSDFITNPNIWVSVPIAEGESDLDDLEE
DGEEDSQSSQQEVILQGQEQLQVETCEGHTAPRSPGSGMSSEDLASYVDEKWKDEAVAQA
PAEGGDDSSSSGGSTVDCLDPEEILRKIPELADDLEEPDDCFTEGCLRRCPCCKVDISKF
PWTVGWQVRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYHLDQKPTVKALLEYTDRMF
TFIFVLEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLISLIAKILQYSDVASIKALRTLR
ALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSTMGVNFFAGKFGRCINK
TNEYFSLVPLSIVNNISDCKYQNHTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIM
YAAVDARDVNLQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDI
FMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTKQAFDIVIMVLICLNMITM
MVETDEQSAEKTKILNKINQFFVAVFTGECVMKMFALRHYYFTNGWNVFDFIVVVLSIGS
LVFSVILTSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLL
LFLVMFIYSIFGMASFPHVSWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNT
GPPYCDPNLPNSNGSRGNCGSPAVGILFFTTYIIISFLIVVNMYIAVILENFNVATQESS
EPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNQNILIQMDLPLV
PGDKIHCLDILFAFTKNVLGESGELDSLKANIEEKFMATNVSKASYEPIATTLRWKQEDI
SATVIQKAYRSYVLHRSMTISNPPAVPRAEEAVPPPDEAFVEFMVNENCALPDKSETASA
ASFPPSYDSVTRGLSDQINMSTSSSMQNEDEGTSKKVTAPGP
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggaatttccctttgggtccctggaaactaccaactttcgtcgattcactccagagtcc
ctggtggagattgaaaagagaattgctgccaagcaggcagcaaagaaagcaaaaggtaag
cacagggagcagaaggaccaagaagagaagcctcggcctcagctagacttgaaggcttgc
aaccagccgcccaagttctacggtgagctcccagcagagctggttggagagcccctggag
gatttggaccccttctacagcacacaccggacatttatggtgctggacaaagggaggacc
atttcccggtttagtgctactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtctgtccactcgtggttcagtttatttattacagtcactatt
ttggtcaattgtgtgggcatgacccaaaccgagcttccagacagaatcgagtatgtcttc
actgtcatttacacctttgaagccttgataaagatactggcaagaggattttgtctaaat
gagtttgcttacctgcgagatccttgggactggctggattttagtgtcattaccctggca
tacattggtgaagcaacagctctccgagggatctcaggcttgcggacattcagagttctt
agagctttaaaaacagtttctgtgatcccagggctgaaggtcattgtgggagctctgatc
cactcagtgaggaaactggcagatgtgaccatcctcactgtcttctgcttgagtgtcttt
gctctggtgggcctacagctcttcaagggcaacctcaagaacaaatgtgtcaagaattgt
gcagctctcaatgaaacgggcaattactcctcttatggaaaacaagagtggaatttctgc
catagggacgaagatttctactataacaagcctggcacttcagatcccttactgtgtggc
aatggatctgatgcaggccactgccctaaaggttatctctgtcttaaaacatctgacaac
ccagattttaactacaccagctttgattcctttgcttgggctttcctgtcactgttccgc
ctcatgacacaggattcctgggaacgcctctaccagcagaccctgagggcatctgggaaa
atgtatatggtctttttcgtgcttgtcatcttcttgggatccttctacctggtcaatttg
atcttggctgtggtcaccatggcatatgaggagcagaaccaggcaaccattgatgaaatt
gaagccaaggagaagacatttcaagagaccctggagatgccccggaaggagcaagaggtg
ctggcagcactggggattgacacagcctctctccattcctgcaatggctcacctttaccc
tccaaaaatgccagtgagagaatgcgcagaatgaaaccaagggtgtcagagggctccaca
gatgacaacaaatcacctcaatctgatccttacaaccaacgcagaatgtctttcctaggc
ctcacttctggaagacgcagggctagtcatggcagtgtgttccatttccgtaccccttgc
ctggatacctcattccctgacggggtcacagatgatggagtctttcctggagaccgtgag
agccatcggggctccctgctgctgggtggaggtaccagccagcaaggccccctcctaagg
agtccactgcctcaaccccctaaccctggctcaggacatggagaagacggacactccaca
ttgcccactggtgagcttgcccctggaggcatcgaagtctcggcatttgatgcaggacag
aagaagactttcttatcagcagaatacttgaatgaacctttccgggcccaaagggcaatg
agtgtggtcagcatcatgacctctgtccttgaagaactcgaggagtctgaacggagatgc
ccaccctgcttgaccagcttcgctcagaagtatctgatctgggagtgctgccccacatgg
gtgaagctcaagacggttctctttggcattgtgacggacccctttgcggagctcactacc
accttgtgcattgtggtaaacacagtcttcatggccatggagcaccacggcatgagctct
gcctttgaagccatgctccagataggcaacattgtctttactgtgttttttactgctgaa
atggtcttcaaaatcattgccttcgacccctactattacttccagaagagatggaacatc
tttgactgcatcattgtcactgtgagcctgatagagctgggtgcggccaggaaggggagc
ctgtcagtgctgcggaccttccgcttgctgcgggtctttaagctggccaagtcctggcca
accttaaacacactcatcaagatcatcgggaactcagtgggggcactaggaaacctcacc
atcatcctggccatcattgtctttgtcttcgctctggttggcaaacagctacttggggaa
aactaccgtgacaaccggcgcaatatctctgcgcccaatgaagaatggccacgctggcac
atgcatgacttcttccactccttcctcatcgtcttccggatcctgtgtggagagtggatt
gagaacatgtgggcctgcatggaagttggccagaaatccatatgcctcatccttttcttg
acagtgatggtgctggggaacctggtagtcctcaacttgttcaccgccctgctgctgaac
tccttcagtgccgacaaccttgcaactccagatgaagatggggaggtgaacaacctgcag
gtggccctggcacggatccaggcatttggccatcgtaccaagaaggccatttgcaacttc
ttcactaggccctgcctgctgccctggcccaaggcagagccccagctggtggtgaaactc
ccactctccagctccaaagctgagaaccacattgctgctaatgcagctgtggggagccct
ggagggctctcagtgtccagaggcctcagggacgaccacagtgacttcatcaccaatcct
aacatatgggtctctgtgcccattgcagagggtgaatctgacctcgatgacctggaggaa
gatggtgaggaggattctcagagttcccagcaggaagtgatcctccaagggcaggagcag
ctgcaagtcgagacgtgtgagggccacacggcgcccaggagcccaggctctggaatgtcc
tctgaggacctggcttcctacgtggatgagaagtggaaagacgaggctgttgcccaggcg
cctgcagagggaggggacgacagcagctcctcagggggcagcacggtggactgcctggat
cccgaggagatcctgaggaagatccctgagctggcagatgaccttgaagagccagatgac
tgcttcacggaaggctgtcttcgccgctgtccctgctgtaaagtggacatcagcaagttt
ccatggactgtgggatggcaggtgcgcaagacctgctaccgcatcgtggagcacagctgg
tttgagagtttcatcatcttcatgatcctgctcagcagtgggtctctggcctttgaagac
tatcaccttgaccagaagcccacagtgaaggccttgctggaatatactgacaggatgttt
acttttatcttcgtgctggagatgttgctcaagtgggtggcctacggctttaagaagtac
ttcaccaatgcctggtgctggctggactttctcatcgtgaacatctccctgataagcctt
atagcgaagatcctgcaatattctgatgtggcatccatcaaagcccttcggaccctccgt
gccctgaggcccctgcgggctctgtctcgattcgaaggcatgagggtggttgtagatgcc
ctggtgggtgccatcccatccatcatgaatgtcctcctcgtctgcctcatcttctggctc
atcttcagcaccatgggtgtgaacttctttgcggggaagtttgggcgatgcatcaacaaa
accaatgaatacttttctcttgtgcctttgtctattgtgaataacatatctgactgtaaa
tatcagaaccacactggcagcttcttctgggtcaatgtgaaggtcaactttgataatgtt
gcaatgggttacctagcacttctgcaggtggcaacctttaaaggctggatggacataatg
tatgcagctgttgatgcccgagatgtgaacttgcagcccaagtgggaggacaacgtgtac
atgtacttgtactttgtcatcttcatcatttttggtggcttcttcacactcaatctcttc
gttggggtcataattgacaacttcaatcaacagaaaaaaaagttagggggccaggacatc
ttcatgacagaggagcaaaagaagtactataatgccatgaagaagctaggctctaagaag
ccccagaagcccatcccacggcccctgaacaagtaccagggctttgtctttgacattgtg
accaaacaagcttttgacattgtcatcatggtcctcatctgcctcaacatgatcaccatg
atggtggagactgatgagcagagtgcagaaaagacaaaaattcttaacaaaatcaaccag
ttctttgtggctgtctttacgggcgagtgtgtcatgaagatgtttgccttgcggcattac
tacttcaccaatggttggaatgtgtttgacttcattgttgtggtcctctccattggaagc
ctggtgttttctgtaatacttacgtcacttgaaaattacttctctccaacgctcttccga
gtcatccgcctggcccgaattggccgcatcctcaggcttatacgagcagccaagggaatc
cgcacactactctttgcccttatgatgtccttgcctgccctcttcaacatagggcttctg
ctcttccttgtcatgttcatctactccatcttcggcatggctagcttcccccatgtaagt
tgggaagctggcatcgatgacatgttcaactttcagaccttcgccaacagcatgctgtgc
ctcttccagatcaccacgtcggctggctgggatggcctcctcagccccatcctcaacacg
gggcctccttactgtgaccccaatctacccaacagcaatggctcccgggggaactgtggg
agcccggctgtgggtatcctcttcttcaccacatacatcatcatctccttcctcatcgtg
gtcaacatgtacattgcagtgattctggagaacttcaatgtggccacacaggagagcagt
gaacctctgagtgaggatgacttcgatatgttctatgagacctgggagaagtttgaccca
gaggccactcagtttattaccttttctgccctctcagactttgcagacaccctttctggc
cccctgcgaatcccaaaacccaatcagaatatattaatccagatggacctgcccttggtc
cctggagataagattcactgtttggacattctttttgccttcactaagaatgttctggga
gaatccggagagttggattctctgaaggcgaatattgaagagaagtttatggcaactaat
gtctcaaaagcatcctatgaaccaatagcaaccaccctccggtggaagcaggaagacatt
tcagctactgtcattcaaaaggcctatcggagctatgtgctacaccgctccatgacaatt
tccaaccccccagctgtgcccagggcagaggaggctgtgccacccccagatgaagctttt
gttgaattcatggtaaatgaaaattgtgcactcccagacaaatctgaaactgcatctgcc
gcatctttcccaccatcctatgacagtgtcactagaggccttagtgatcaaatcaacatg
agcacatctagctcaatgcagaatgaagatgaaggcaccagtaagaaagtgactgctcct
gggccctag
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integrated database retrieval system
