Canis lupus familiaris (dog): 478089
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Entry
478089 CDS
T01007
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03022
Basal transcription factors
cfa03420
Nucleotide excision repair
cfa05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
478089
09124 Replication and repair
03420 Nucleotide excision repair
478089
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
478089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
478089
03400 DNA repair and recombination proteins [BR:
cfa03400
]
478089
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
478089
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
478089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
VWA_3
Motif
Other DBs
NCBI-GeneID:
478089
NCBI-ProteinID:
XP_005617523
Ensembl:
ENSCAFG00000007808
UniProt:
A0A8C0MEZ4
A0A8I3NN67
LinkDB
All DBs
Position
2:51520233..51546214
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AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSNTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDPFQEIPLEEHNGERFCYGCQGELKDQHVYVC
AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPTSSGI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacctgaaagaactaagcgatgggaaggaggctatgaaaggacatgggag
attcttaaagaagatgagtcaggatcattgaaagctacaatagaagacattctcttcaaa
gcaaagagaaaaagagtatttgaacaccatggacaagttcggcttggaatgatgcgtcat
ctttatgtggtagtcgatggatcaagaacaatggaagaccaagatttaaagccaaataga
ttgacttgtaccctaaagttgttggaatacttcgtagaagaatattttgatcaaaatcct
attagccagattggaataattgtaacaaagagtaaaagagctgaaaaactgaccgaactc
tcaggaaatccaaggaaacatataacatctttgaagaaagctgtagatatgacctgccac
ggagaaccctctctctataactccttaagcatggctatgcaaactctaaaacacatgcct
ggacatacaagtagagaagtcctaatcatctttagcagcctcacaacttgtgatccatct
aatatctatgatctaatcaagaccctcaaggcagctaaaattagagtttctgtcattgga
ttatctgcagaggttcgagtttgcaccgtacttgctcgtgaaactggcggcacataccat
gttattttagatgaaagccattacaaagaattactgacacatcacgttagtcctccacct
gctagctcaagttctgaatgttcacttattcgcatgggatttccgcaacataccatcgct
tctctgtctgaccaagatgcaaagccctctttcagcatggcgcacctggatagcaacacg
gagccaggacttacattaggagggtatttctgccctcagtgtcgggcaaagtactgtgag
cttccagttgaatgtaaaatctgtggtcttactttggtgtctgctccacatttggcaagg
tcttaccatcatttatttcctttggatccttttcaagaaattcctctagaagaacataat
ggagaaagattttgttatggatgtcagggggaattgaaagaccagcatgtctatgtttgt
gccgtgtgccaaaatgttttctgtgtggactgtgatgtttttgttcacgactctctccac
tgctgtcctggctgtattcataagattccaacatcttcaggtatttga
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