Canis lupus familiaris (dog): 490529
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Entry
490529 CDS
T01007
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03013
Nucleocytoplasmic transport
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
490529 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
490529 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
490529 (THOC1)
03041 Spliceosome [BR:
cfa03041
]
490529 (THOC1)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
490529 (THOC1)
Spliceosome [BR:
cfa03041
]
Complex C
Other components
EJC/TREX
490529 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
490529 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
490529
NCBI-ProteinID:
XP_547651
Ensembl:
ENSCAFG00000018324
VGNC:
47348
UniProt:
A0A8C0NVM3
A0A8I3ML03
LinkDB
All DBs
Position
7:complement(66535949..66590326)
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AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVARKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFASKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLMNALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggttcacgaagtct
accagagaggccctcaacaacaaaaatatcaagccattgttgaataccttcagccaatta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcatctacaccttttgtattgttgggagatgtt
ttggattgtcttcctctggatcaatgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatttactacgtatgtgc
aatgatctcctaagaagattatcaaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcaa
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccttgggtcag
aagcacactgaggatagagaagaaggaatggatgttgaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgactacaacctgtatcgaaaattctggtca
cttcaggattacttcaggaaccctgtgcaatgctatgagaagatttcatggaaaactttt
cttaagtattctgaagaagttctagctgtttttaaaagttataaattagatgatactcaa
gcctcaaggaaaaaaatggaagaattaaaaacaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttgcaactgagcgacagtaactttcgccgacac
atcctgttgcaatatctcattttattccagtatctcaagggacaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagacaccaagccaacaagagtagctcgaaagagaacggcaccagag
gactttctagggaaaggacccaacaaaaagattctgatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgataatatggaagcctgcaaatcagaaacaagggaatacatg
ccgactttggaagaattctttgaagaagccattgaacaggcagaccctgaaaacatggtt
gaaaatgaatacaaagctgtgaacaattcaaattatggttggagagccctgagactatta
gcacgaagaagccctcacttcttccagccaaccaaccagcagtttaaaagtttgccagaa
tatcttgaaaacatggtaataaagctagcaaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagc
cctgatgttcggcgcgacaaacctgtaacaggggaacagatagaggtgtttgccagtaaa
ctgggtgagcagtggaagatcctggctccctacttggaaatgaaagactcagaaattaga
caaattgagtgtgacagcgaagacatgaagatgagagctaagcagcttctagttgcctgg
caagatcaagagggagtacatgcaacacctgagaatctgatgaacgcactaaataagtcc
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
DBGET
integrated database retrieval system