Canis lupus familiaris (dog): 493763
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Entry
493763 CDS
T01007
Symbol
RHO
Name
(RefSeq) rhodopsin
KO
K04250
rhodopsin
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
493763 (RHO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cfa04030
]
493763 (RHO)
G protein-coupled receptors [BR:
cfa04030
]
Rhodopsin family
Vision
Opsin
493763 (RHO)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srsx
7TM_GPCR_Srx
7tm_4
TAS2R
Motif
Other DBs
NCBI-GeneID:
493763
NCBI-ProteinID:
NP_001008277
VGNC:
45554
UniProt:
P32308
A0A8C0P150
A0A8I3QE57
Structure
PDB
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All DBs
Position
20:complement(5669643..5674903)
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AA seq
358 aa
AA seq
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MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY
VTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNVEGFFATLG
GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSSLLS
HSPLVLRYIPEGMQCSCGIDYYTLKPEINNESFVIYMFVVHFAIPMIVIFFCYGQLVFTV
KEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSDFGPIFMTL
PAFFAKSSSIYNPVIYIMMNKQFRNCMITTLCCGKNPLGDDEASASASKTETSQVAPA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggacggagggcccgaacttctacgtgcccttctccaacaagacgggtgtggtg
cgcagccccttcgagtacccacagtactacctggctgagccatggcagttctccatgctg
gctgcctacatgtttctgctgatcgtgctcggcttccccatcaacttcctcacgctctac
gtcacagtccagcacaagaagctgcgtacacctctcaactacatcctgctcaacctggct
gtggctgacctcttcatggtcttcggtggcttcaccaccaccctctacacctctctgcat
ggatactttgtcttcgggcccacaggatgcaatgtggagggcttctttgccacactgggc
ggtgaaattgccctgtggtctttggtggtcctggccattgagcggtacgtggtggtgtgt
aagcccatgagcaacttccgttttggggagaaccatgccatcatgggcgtcgccttcacc
tgggtcatggcactggcctgtgcagcaccccccctcgctggctggtccagtctcctgtct
cactcccctctggtgctcaggtacatcccagagggcatgcagtgctcatgtgggatcgac
tactacacactcaagccagaaatcaacaatgagtccttcgtcatctacatgttcgtggtc
cacttcgccatccccatgattgtcatattcttctgctatggacagctcgtcttcacagtc
aaggaggcagctgcccagcagcaggaatcggccaccacccagaaggctgaaaaggaggtc
acccgcatggtcatcatcatggtcatcgctttcctgatctgctgggtgccctatgccagt
gtggcattctacatcttcacccaccagggctccgactttggccccatcttcatgaccctc
ccagcgttcttcgccaagtcctcctccatctacaaccctgtcatctatatcatgatgaac
aagcagttccggaactgcatgatcaccaccctctgctgtggcaagaacccactgggtgac
gacgaggcctctgccagcgcctccaagacggagaccagccaggtggcaccggcctaa
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