Canis lupus familiaris (dog): 611386
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Entry
611386 CDS
T01007
Name
(RefSeq) LOW QUALITY PROTEIN: POM121-like protein 2 isoform X3
KO
K14316
nuclear pore complex protein Nup121
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03013
Nucleocytoplasmic transport
cfa05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
611386
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
611386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
611386
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
611386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
611386
NCBI-ProteinID:
XP_022270235
LinkDB
All DBs
Position
35:complement(24528715..24538375)
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AA seq
1079 aa
AA seq
DB search
MTAAKAVSQTRVPSKLRKLEAGSGPARALDSLRPEPPGSGALSRVLLSSRLQLEGDQDSD
LGKTLDRAGRVAGRSEPRVCPPALRTPSATSTHPAGLGPHGSPRLWGTCGLTRPCRGRTP
GPLSGRSQSWRPVGNSTAARGRRGDSGRTVPDRAVGTSETARSLLAGPPRAAAAAESAQA
WRRAEASGPHSELLELRRPLSPVPKGLPSARDPRTFLAPGSGSTVRGTRRTPTPAESARN
LGNRPVTGQAGVPAVVATRGAHGRDREAAEPPTGSAASTGPPGSALSHGEEPGCSSMNSL
ASTRTGGPLGSRRNAISSSYSSSRAFSESWKRSVPSASLQPPERPVKKKGKGHHSHSLVP
MYSDQFPAASGEPSLQXPQLFSSPGDLLSQTPPAQLGDADPEGNVALGKKGRLQCSNPAR
EETPEGTTHSGSDTWSAAQPSLSLPMXLAGTAPTQGTNPQMESLADRQEPPGEDVSVAHS
PLEVWRLLSSHGFPCXQSGPLLGTSSDSHPTATSILLTPVSPTCPVTDATWPSSPSPRTP
MPPXPPPPTTLPVQSTLFGVSSPAPHFPASSCPAATSAGHIXSPVWGPPPYSEIRGSLYS
STSVVAAASSTPAVFAPTFKPIFGGLGPLKTLPRIAHFSFKQTSPPAPPTSIHLLHSLVK
TTSVVMATTPGSTSKDSSFTQPLDFGVSTSTMDSTYSIPSTCHTLLLGAACAFRASFSPD
TSFIFPPQQRATIPTVHTVTIFSQVLTSAVQISPNKSTANFRGVGDPLSASALVTTNQPS
LSSSISSPTLAFAVSLGSGSRPSFPLSPGATSQPAFRATGGQKPGALQPALGPSFSSSFI
FGNSAVVSPTSTLTPAQPAFSSTTQSPCGGLTPSTSTFHIPSSILPNLGSTLAGFPFGQP
STTDIGVVNQTHQNGACGSVFSSTAPRPFAFGGLVTPMDCGEIGISAPDMSSNSGAFSIG
AVPSGTTSTMTPFGKGCSQNTQGLTSQNTPFVVGRASISARKTMSGGPCMAPFAQSMPVP
GPIQTNSSLGFGMPSPLAQGSPGRGPXRSSASSFSIGAKSKPPKNREQGHSRRHHAHKK
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagcaaaagcagtaagccaaacacgagtcccttctaaactccggaagctggaa
gctggctccgggcccgccagagccctagactcgctgcgcccggagccacccggctctggg
gccctctccagggtcctcctgtcgtcccgcctgcaattggagggtgaccaggattcggac
ctcgggaagaccctggaccgggccgggagggttgcaggccgctcggagccccgggtctgt
cctccagccctgcgcaccccgagcgccaccagcacccaccctgcggggctgggacctcac
ggctcaccccgactctggggaacctgcgggctgacccgtccgtgccggggtcgcacgcct
ggacccctgagcggccgcagtcagagctggagacccgtcggcaactcgactgcagctcgg
ggacggcgcggggactcgggccgcacagtccctgaccgcgctgtgggcaccagcgagacc
gcgcgctccctcctggcgggtcccccgcgcgccgccgccgccgccgagagcgcacaggcc
tggcgccgcgctgaagcctcaggaccgcacagcgagctgctggagctgcggcggccactc
tccccggtccccaaggggctgccgagcgcccgagacccgcgcactttccttgcgccggga
tccggttcaaccgtccgcggaacaaggcgcactccgactccggctgagtcagccagaaac
ctcgggaaccgaccagttactgggcaagctggggtccccgcggtcgtcgccaccagaggt
gcgcacgggcgagaccgggaggccgccgaaccgccgacgggctcagccgcttcaacaggt
ccaccgggttcggcgctttcccatggagaggagcccggttgctcctccatgaactccttg
gccagcacacgcacaggtggcccccttggctccaggagaaatgcaatctcaagttcctac
agctcttctagagctttctctgagtcttggaagagaagtgttcccagtgcctctctgcag
ccaccagaaaggcctgtaaaaaagaaaggcaagggtcatcattctcactctctggtcccg
atgtactcagaccagttcccagcagcttctggggaaccaagtctgcagnagcctcagctt
ttctctagccctggggacctgctgtcacagaccccacctgcccagctaggggatgcagac
cctgaagggaacgtggccttagggaaaaaaggtagactccagtgcagcaatccagccaga
gaggagacgcctgagggcaccacccactctggctctgacacttggtctgctgctcagcct
tcgctgtctcttcccatgnctcttgcaggcacagctccaacccagggcacaaatccacag
atggaaagcttagcagacaggcaggagcctcctggggaggatgtcagtgtagcccattca
cctctggaggtctggagactgctgtcttcacatggcttcccctgcnaccagtcagggccc
ctgctgggcacttcttcagactcacatcccacagccacatccatcttgttgaccccagtt
tctcccacctgtccagtcactgatgccacatggccctcatctccctctcctaggactccc
atgccccccnnaccaccaccaccaacaacacttcctgtgcaaagtactttgtttggagtg
agtagcccagctccccattttcctgcatcttcatgtcctgctgcaacttctgctggacac
atcnngagccctgtttgggggcccccaccctacagtgagatcagaggctccttatattcc
agcacttctgtggtggctgcagcatcttcaactccagctgtcttcgctcccaccttcaag
cctatctttggtggcctaggacctctgaaaactctgcccaggatagctcacttctctttc
aagcaaacctctcctccagctcctcccacttctatccatctgctccatagcctggtcaag
acgacttctgtagtcatggccaccaccccaggcagcacatccaaagactcttctttcaca
cagcctttggattttggtgtcagtaccagtaccatggacagcacttactccatcccttct
acttgccacactttacttcttggggctgcctgtgccttcagagccagcttctctccagac
acaagcttcatcttcccaccacagcagcgtgctaccattcccaccgtacacacagtcacc
atctttagccaggttcttaccagtgctgtccagatatccccaaataaaagcactgccaat
tttcggggtgtgggtgatcctctttcagcctcagccctggtcaccacaaaccagccctca
ttatcatccagcatctccagtccaaccttagcatttgccgtttccttggggtcaggctcg
aggccatctttcccactctccccaggagccacctcccagccagcattcagggctacaggt
ggacagaagccaggagccctccaaccagccctgggcccaagcttcagtagctctttcatt
tttggaaactctgcagtggtgtccccaacctcaaccctaactccagctcagccagccttc
agcagtaccacgcagtcaccctgtgggggtttgacaccctcaacctccacctttcacatc
ccttccagcatcttgccaaatttgggcagtactctagcaggttttccctttggtcaacct
agtacaactgatattggagttgtcaaccagacccaccagaatggggcttgtggttcagtg
ttcagcagcacagccccacgaccttttgcctttgggggattggtgacccctatggactgt
ggggagattgggatcagtgccccagacatgagctccaactctggagcattcagcattgga
gcagtgccaagtgggacaactagtaccatgacaccctttggaaaaggctgtagccagaac
acccaaggcctgaccagccagaacacaccttttgttgtggggagggccagcatttctgca
agaaagactatgtctgggggcccctgcatggccccctttgctcagagcatgcctgtccct
gggccaatacagactaacagtagccttggctttgggatgccctctccacttgctcagggt
tctcctgggagaggacctnncagatcatcagcctcttcattttccattggtgcaaaatca
aaacccccaaagaatcgggagcaagggcattcccgaaggcatcatgcacacaagaaatag
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